The gene/protein map for NC_000909 is currently unavailable.
Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668657

Identifier: 15668657

GI number: 15668657

Start: 422467

End: 423063

Strand: Direct

Name: 15668657

Synonym: MJ0480

Alternate gene names: NA

Gene position: 422467-423063 (Clockwise)

Preceding gene: 15668656

Following gene: 15668659

Centisome position: 25.37

GC content: 30.15

Gene sequence:

>597_bases
ATGTTTGGTTCTATATTTGACATATATTATAAAACCTTGGATGCAATTTTCATGCCTATAATAAAAGTTCTACATCCCGC
TTTAGCAATTTTAATTATTGCAATAATTGTCTCTTTAATCATAAATATAGCTACAAAACTTTTAGTTGACCAGAAGAGAG
TTGCTGAACTAAAAAAGGAGATTCAGGAATTTCAGGTTAAATTTAAAAAAATGTCTAAAAATCCTGAAATGATGGAAAAA
CTTCAAGAAGAACAACAGAGAATTATGCAACTCAACGCTGAATTAATGAAGATGAGTTTTAGGCCGATGATATATACATG
GGTTCCAATAATTTTAATATTTATTTATTTGAGGCATGTTTATGGGTTTGGTGGAGTTTATCAAGAGTTAAATCCTGGTT
GGAATGGAGTTGTTGTGTATCTACCTATAATATTGTCAAAGATTTTGTTTATTGATTTCTGGCACTGGCTTGGTTCAATA
TTTTATAAAGGAGGATTTAAAATAGTTTCTAACACTGCCTTAGGTTGGTTAGGTTGGTATATTCTCTGTTCATTCGCAAC
ATCTACTGTATTGAGAAAGATACTTGGAATAAAATAA

Upstream 100 bases:

>100_bases
TTTTATTAGATAAAGCAGTTCAAGAACTTATTGAAGTTCTCAAATAATCCTTATATAATATTTTAAAATAATTTTTAAAT
AACCACATTAAGGTGAGTTA

Downstream 100 bases:

>100_bases
ATGATTAAGGTTCTTCTCTATTTTCAGTTTCTTCTTTATCTTTCTGTTTTTCCTCAACTTTTAAAAATTTATTTTTCTTC
TTTTTCTCTAATTTTTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK
LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI
FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK

Sequences:

>Translated_198_residues
MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK
LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI
FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK
>Mature_198_residues
MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK
LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI
FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK

Specific function: Unknown

COG id: COG1422

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y480_METJA (Q57904)

Other databases:

- EMBL:   L77117
- PIR:   H64359
- RefSeq:   NP_247456.1
- GeneID:   1451342
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0480
- NMPDR:   fig|243232.1.peg.493
- TIGR:   MJ0480
- HOGENOM:   HBG540959
- OMA:   KMYHSAL
- ProtClustDB:   CLSK876199
- BioCyc:   MJAN243232:MJ_0480-MONOMER
- InterPro:   IPR002809

Pfam domain/function: PF01956 DUF106

EC number: NA

Molecular weight: Translated: 23072; Mature: 23072

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xca862f8)-; HASH(0xc51aed4)-; HASH(0xc9e4428)-; HASH(0xceb9298)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEFQVKFKKMSKNPEMMEKLQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSIFYKGGFKIVSNTALGWLGWY
HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILCSFATSTVLRKILGIK
HHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEFQVKFKKMSKNPEMMEKLQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSIFYKGGFKIVSNTALGWLGWY
HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILCSFATSTVLRKILGIK
HHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087