| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668608
Identifier: 15668608
GI number: 15668608
Start: 387846
End: 388124
Strand: Reverse
Name: 15668608
Synonym: MJ0432
Alternate gene names: NA
Gene position: 388124-387846 (Counterclockwise)
Preceding gene: 15668609
Following gene: 15668607
Centisome position: 23.31
GC content: 24.01
Gene sequence:
>279_bases ATGAAAATATTTAACTCTGTTGTTAGGGTTAAAATATTGGCCTTATTGTATGGTTTAGAATATTGCGAATTTAATTATTT AAAAGAAAAGTTAAATTTAACTGATGGTAATTTAGAACATCATTTAAAGAAATTGGAAGAATGTGGATTTGTAGAGACTA AGAAATCAGTAATAAAGGGTAGGGTTAAAACAATAATTAAAATTACCAATAAAGGCAGGGTTGCATTCAAAAACTATATA TATGAAATTTTACAATTATCAAAAAATATAGAGTGTTAA
Upstream 100 bases:
>100_bases TTCCAATGTTTATATTTCATGAATATCAGTTTTTAATTTTTGCTTTTGTTCAGTTTTTAGTTGCTTTATGTTTTTTAATA TGTAAAGAATAAGTGAAATT
Downstream 100 bases:
>100_bases TTTTCAATGTTCGTTTAATTATTAGACATTTTTAAAGTTGTTATTAGGTTTATAAATAAGCCTTTATTCTTGTATAAAAA TTTAGTGTTTCATATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MKIFNSVVRVKILALLYGLEYCEFNYLKEKLNLTDGNLEHHLKKLEECGFVETKKSVIKGRVKTIIKITNKGRVAFKNYI YEILQLSKNIEC
Sequences:
>Translated_92_residues MKIFNSVVRVKILALLYGLEYCEFNYLKEKLNLTDGNLEHHLKKLEECGFVETKKSVIKGRVKTIIKITNKGRVAFKNYI YEILQLSKNIEC >Mature_92_residues MKIFNSVVRVKILALLYGLEYCEFNYLKEKLNLTDGNLEHHLKKLEECGFVETKKSVIKGRVKTIIKITNKGRVAFKNYI YEILQLSKNIEC
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y432_METJA (Q57874)
Other databases:
- EMBL: L77117 - PIR: H64353 - RefSeq: NP_247406.1 - ProteinModelPortal: Q57874 - SMR: Q57874 - GeneID: 1451292 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0432 - NMPDR: fig|243232.1.peg.443 - TIGR: MJ0432 - HOGENOM: HBG429342 - OMA: GLEYCEF - ProtClustDB: CLSK2517607 - BioCyc: MJAN243232:MJ_0432-MONOMER - GO: GO:0005622 - InterPro: IPR001845 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF01022 HTH_5
EC number: NA
Molecular weight: Translated: 10768; Mature: 10768
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFNSVVRVKILALLYGLEYCEFNYLKEKLNLTDGNLEHHLKKLEECGFVETKKSVIKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH RVKTIIKITNKGRVAFKNYIYEILQLSKNIEC HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIFNSVVRVKILALLYGLEYCEFNYLKEKLNLTDGNLEHHLKKLEECGFVETKKSVIKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH RVKTIIKITNKGRVAFKNYIYEILQLSKNIEC HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087