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The map label for this gene is rpoE2

Identifier: 15668572

GI number: 15668572

Start: 357795

End: 357974

Strand: Reverse

Name: rpoE2

Synonym: MJ0396

Alternate gene names: 15668572

Gene position: 357974-357795 (Counterclockwise)

Preceding gene: 15668573

Following gene: 15668571

Centisome position: 21.5

GC content: 31.67

Gene sequence:

>180_bases
ATGAGAGCATGTTTAAAATGTAAATACTTAACAAATGATGAAATATGTCCAATATGCCACTCTCCAACAAGTGAAAACTG
GATAGGGCTTTTAATAGTTATAAATCCAGAGAAATCAGAGATTGCTAAAAAGGCAGGAATAGATATTAAAGGAAAGTATG
CATTAAGTGTGAAAGAGTAG

Upstream 100 bases:

>100_bases
TAGTAAGATAGCATTAACCATGAGACAGCCATACTTGGGAAAATTAGAGTGGATTGAGGAGGAAAAAGCTAAAAAGCAAA
ATCAAGAATAAGGTGAGCTT

Downstream 100 bases:

>100_bases
AGGAATTGATATGCTGGTGCTTCCAGAGGAGTTGAGGGAAAAATTAAAAAAGCCCTTTGGAAAAGTATATAAAACACTAC
CAGATATAGATGGAGATATC

Product: DNA-directed RNA polymerase subunit E''

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE

Sequences:

>Translated_59_residues
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE
>Mature_59_residues
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOE2_METJA (Q57839)

Other databases:

- EMBL:   L77117
- PIR:   D64349
- RefSeq:   NP_247370.1
- PDB:   3LPE
- PDBsum:   3LPE
- ProteinModelPortal:   Q57839
- SMR:   Q57839
- DIP:   DIP-46332N
- GeneID:   1451253
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0396
- NMPDR:   fig|243232.1.peg.407
- TIGR:   MJ0396
- HOGENOM:   HBG297509
- OMA:   TSENWIG
- ProtClustDB:   CLSK2749878
- BioCyc:   MJAN243232:MJ_0396-MONOMER
- BRENDA:   2.7.7.6
- InterPro:   IPR007178
- InterPro:   IPR022800
- ProDom:   PD019197

Pfam domain/function: PF06093 Spt4

EC number: =2.7.7.6

Molecular weight: Translated: 6578; Mature: 6578

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE
CCCCEEEEECCCCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE
CCCCEEEEECCCCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087