The gene/protein map for NC_000909 is currently unavailable.
Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668561

Identifier: 15668561

GI number: 15668561

Start: 350177

End: 351304

Strand: Direct

Name: 15668561

Synonym: MJ0385

Alternate gene names: NA

Gene position: 350177-351304 (Clockwise)

Preceding gene: 15668560

Following gene: 15668565

Centisome position: 21.03

GC content: 29.61

Gene sequence:

>1128_bases
GTGATTATAAAGGGGCTGAGAGTAGAGAAGGAAAAGCTCCAAAGTTTGCAGAAGTTTTGGAGGTTGAGAGTTATGTTATT
TGAGACACCAGGATATAATGAGATACTTGATTTATATATAGCTTATGGAGTAGTTGAGTGTTTAGTTAGAGAAGGCGTTG
AAAATCTCAGATTTTTCCCAATTGGGAATAAATATTGTATTGTAGTTGAAGAACCTACTAATGTAAATATTAAAAATAGA
ATTGAAAAGGGAATGTTAAATGCATTGGAGGATATGCTTTCCCTGCATAAAGCTATTGGTAAGTATATTTCCACAAAGGA
GGATATCAAAATTATAAGTGATGTTGATTTTAGTGCAGGTGCAAATATTAATAACGTTTATTGGGATGGAATTCCAAAAA
CTCTTGAAAAGATAAAAGAAAATATTAAAAAAGGAAAATTATCTACAAAGAGTAAAAATACAGTGCCACTTACTTTAATG
CCAGCTGCTGGTAAATATATGCCAAAAATTTATGGTGTAAAAGGTGGAAATCCAATAAAAATAGATGATTCCAACTATGC
CCTTGCCTGGATTGGTTTCCATTATTATGCTCCATACATAAATATATCAGACAATAGAGCAACATATATTCATATTTATG
CCATAAAACCTCTTGAAGAATTAGGACTTATTGAAATCCTTGCTTTAAAAGATTTAAAAAAGAAAATTAACAACTATCAA
CTTGGAAAATATAAATTTTTTGTAAATAAAAAATTGGCACTGCTATATCATTTAACCCATACTGAATCAATAAGTGCCTT
GGAAATAGTTACAAAAAAGAATTTTTCAGTTGTTAGTTACACTCTCGAGAATGTTGATAACAATCAAGCAATACGATCTT
TTGGAGAGTATGATTTATCAAAACTTATGGACTTTTTATGGTATTTAAAAGCTACTGATTTCTATAATACAATCCAGTTT
GTAGATAACATACTTAGAGGTGATTTAGAAGTTTCCCTAACCTTCATAGATGGTATTCTTTATGATGACTTAGATGCAGT
ATATTCAGCTATAAGAAAGTTAAAAAGTGTAAGAATATCTCCTCTAATTATTCAGAGTATTTTGGAATGGTTTGGAAATT
TTTATTAA

Upstream 100 bases:

>100_bases
ATCAGATTTGTTATCGAAATGAGTGTTAGAGCAAGACATACACCAAATTCAGAGAAGCTTAGATTTATTGTTGGAACTCT
GCTTTTACCTTTAGTCATGT

Downstream 100 bases:

>100_bases
ATAATATCATCAATTGGATTCTTTTCTAAACCTAAAATCTCTCTTTTTGGCATAAAATTTAATGGAAATTGGTAGATAAT
TACTGAATCTTCATCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MIIKGLRVEKEKLQSLQKFWRLRVMLFETPGYNEILDLYIAYGVVECLVREGVENLRFFPIGNKYCIVVEEPTNVNIKNR
IEKGMLNALEDMLSLHKAIGKYISTKEDIKIISDVDFSAGANINNVYWDGIPKTLEKIKENIKKGKLSTKSKNTVPLTLM
PAAGKYMPKIYGVKGGNPIKIDDSNYALAWIGFHYYAPYINISDNRATYIHIYAIKPLEELGLIEILALKDLKKKINNYQ
LGKYKFFVNKKLALLYHLTHTESISALEIVTKKNFSVVSYTLENVDNNQAIRSFGEYDLSKLMDFLWYLKATDFYNTIQF
VDNILRGDLEVSLTFIDGILYDDLDAVYSAIRKLKSVRISPLIIQSILEWFGNFY

Sequences:

>Translated_375_residues
MIIKGLRVEKEKLQSLQKFWRLRVMLFETPGYNEILDLYIAYGVVECLVREGVENLRFFPIGNKYCIVVEEPTNVNIKNR
IEKGMLNALEDMLSLHKAIGKYISTKEDIKIISDVDFSAGANINNVYWDGIPKTLEKIKENIKKGKLSTKSKNTVPLTLM
PAAGKYMPKIYGVKGGNPIKIDDSNYALAWIGFHYYAPYINISDNRATYIHIYAIKPLEELGLIEILALKDLKKKINNYQ
LGKYKFFVNKKLALLYHLTHTESISALEIVTKKNFSVVSYTLENVDNNQAIRSFGEYDLSKLMDFLWYLKATDFYNTIQF
VDNILRGDLEVSLTFIDGILYDDLDAVYSAIRKLKSVRISPLIIQSILEWFGNFY
>Mature_375_residues
MIIKGLRVEKEKLQSLQKFWRLRVMLFETPGYNEILDLYIAYGVVECLVREGVENLRFFPIGNKYCIVVEEPTNVNIKNR
IEKGMLNALEDMLSLHKAIGKYISTKEDIKIISDVDFSAGANINNVYWDGIPKTLEKIKENIKKGKLSTKSKNTVPLTLM
PAAGKYMPKIYGVKGGNPIKIDDSNYALAWIGFHYYAPYINISDNRATYIHIYAIKPLEELGLIEILALKDLKKKINNYQ
LGKYKFFVNKKLALLYHLTHTESISALEIVTKKNFSVVSYTLENVDNNQAIRSFGEYDLSKLMDFLWYLKATDFYNTIQF
VDNILRGDLEVSLTFIDGILYDDLDAVYSAIRKLKSVRISPLIIQSILEWFGNFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y385_METJA (Q57830)

Other databases:

- EMBL:   L77117
- PIR:   A64348
- RefSeq:   NP_247359.1
- ProteinModelPortal:   Q57830
- GeneID:   1451242
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0385
- NMPDR:   fig|243232.1.peg.396
- TIGR:   MJ0385
- HOGENOM:   HBG539055
- OMA:   KLMDFLW
- ProtClustDB:   CLSK213993
- BioCyc:   MJAN243232:MJ_0385-MONOMER
- InterPro:   IPR010184
- TIGRFAMs:   TIGR01914

Pfam domain/function: PF09703 Cas_Csa4

EC number: NA

Molecular weight: Translated: 43188; Mature: 43188

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKGLRVEKEKLQSLQKFWRLRVMLFETPGYNEILDLYIAYGVVECLVREGVENLRFFP
CCCCCCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCEEEE
IGNKYCIVVEEPTNVNIKNRIEKGMLNALEDMLSLHKAIGKYISTKEDIKIISDVDFSAG
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
ANINNVYWDGIPKTLEKIKENIKKGKLSTKSKNTVPLTLMPAAGKYMPKIYGVKGGNPIK
CCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEE
IDDSNYALAWIGFHYYAPYINISDNRATYIHIYAIKPLEELGLIEILALKDLKKKINNYQ
ECCCCEEEEEEEEEEECCEEEECCCCEEEEEEEEECCHHHCCHHHHHHHHHHHHHHCCCC
LGKYKFFVNKKLALLYHLTHTESISALEIVTKKNFSVVSYTLENVDNNQAIRSFGEYDLS
CCEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHH
KLMDFLWYLKATDFYNTIQFVDNILRGDLEVSLTFIDGILYDDLDAVYSAIRKLKSVRIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
PLIIQSILEWFGNFY
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIKGLRVEKEKLQSLQKFWRLRVMLFETPGYNEILDLYIAYGVVECLVREGVENLRFFP
CCCCCCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCEEEE
IGNKYCIVVEEPTNVNIKNRIEKGMLNALEDMLSLHKAIGKYISTKEDIKIISDVDFSAG
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
ANINNVYWDGIPKTLEKIKENIKKGKLSTKSKNTVPLTLMPAAGKYMPKIYGVKGGNPIK
CCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEE
IDDSNYALAWIGFHYYAPYINISDNRATYIHIYAIKPLEELGLIEILALKDLKKKINNYQ
ECCCCEEEEEEEEEEECCEEEECCCCEEEEEEEEECCHHHCCHHHHHHHHHHHHHHCCCC
LGKYKFFVNKKLALLYHLTHTESISALEIVTKKNFSVVSYTLENVDNNQAIRSFGEYDLS
CCEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHH
KLMDFLWYLKATDFYNTIQFVDNILRGDLEVSLTFIDGILYDDLDAVYSAIRKLKSVRIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
PLIIQSILEWFGNFY
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087