| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668510
Identifier: 15668510
GI number: 15668510
Start: 310176
End: 310919
Strand: Direct
Name: 15668510
Synonym: MJ0335
Alternate gene names: NA
Gene position: 310176-310919 (Clockwise)
Preceding gene: 15668509
Following gene: 15668511
Centisome position: 18.63
GC content: 37.77
Gene sequence:
>744_bases ATGCAGTCAATATTCCTTCCAGTTTTAAATCCAACAACGATTGATGGGCAAGAAATAACTGAAGAGTGGATTAAAAAATA CGGTCCTACGTTGAGGGGTAAGCCCGTCAATATTGACCATAATTATTATTCTAATGGAAATCTCGCAGTTGGGGACGTGG TTGATGTTTATTTTAATCCCGAGGGCAACCTCTATGCCCATATAAGAATCTTCGATGAGATTTATTGGCGTTTGGTAGAT AATGGAATAAAAATCAAGGGAGTTTCTTTTGAATTTAACGATGATGGTGTTGGCGAAGAAGGTATTATGAAGGGCTTAGC TCTCTGCTTAGAGTCGGACCCGAAAGTAGATTTTGCGAGGTTGGTTGAAGGGAATTATGTTCTCGAAGTTTTGGCATCAA TTAAGAGGGATAGTATGGACACTAAGACACAGGAAAAAACTGAACCTAAAAAAATTAAAGACATGACAGAAGAAGAATTT GAGAAGTTCTTACATGAGAAAATTGAGCAAATATTGGCTTCCCATAAAAAAGAAAATGAAGACAAGGATAAAAGCGACAA TGAAGATGATAAGGTTGTTGAAATACTCGCTTCTAAAATGGATGAATTGGTTGCAGTGAATAAGTCAGTATTAAAACAGC TTGAAGAAATTAGGAAAGCCCAAAAGGAAATTCTCGCATCCGCACCAGTGCCTCCTTCTGGTTCTGGAAATTCGGGTCAT AGAAGAGCGAATCTGGGATTATAA
Upstream 100 bases:
>100_bases AGGTCTTGGAATCGGAGGTAGCCAAGTTACAAGGTAAGGTTGAAGTTCTGGAAAAAATAATCTTAAAAAAACTCTAATTT TTTCTTTTTGAGGGAGAGAT
Downstream 100 bases:
>100_bases GGTGAGAATATGACTACTGAAAACATCATCTCTGGCATAGCAATTGCAGACCTCGCACCATACAGATTTGGAAAAATAAC TTCAACTGGAATTGGATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MQSIFLPVLNPTTIDGQEITEEWIKKYGPTLRGKPVNIDHNYYSNGNLAVGDVVDVYFNPEGNLYAHIRIFDEIYWRLVD NGIKIKGVSFEFNDDGVGEEGIMKGLALCLESDPKVDFARLVEGNYVLEVLASIKRDSMDTKTQEKTEPKKIKDMTEEEF EKFLHEKIEQILASHKKENEDKDKSDNEDDKVVEILASKMDELVAVNKSVLKQLEEIRKAQKEILASAPVPPSGSGNSGH RRANLGL
Sequences:
>Translated_247_residues MQSIFLPVLNPTTIDGQEITEEWIKKYGPTLRGKPVNIDHNYYSNGNLAVGDVVDVYFNPEGNLYAHIRIFDEIYWRLVD NGIKIKGVSFEFNDDGVGEEGIMKGLALCLESDPKVDFARLVEGNYVLEVLASIKRDSMDTKTQEKTEPKKIKDMTEEEF EKFLHEKIEQILASHKKENEDKDKSDNEDDKVVEILASKMDELVAVNKSVLKQLEEIRKAQKEILASAPVPPSGSGNSGH RRANLGL >Mature_247_residues MQSIFLPVLNPTTIDGQEITEEWIKKYGPTLRGKPVNIDHNYYSNGNLAVGDVVDVYFNPEGNLYAHIRIFDEIYWRLVD NGIKIKGVSFEFNDDGVGEEGIMKGLALCLESDPKVDFARLVEGNYVLEVLASIKRDSMDTKTQEKTEPKKIKDMTEEEF EKFLHEKIEQILASHKKENEDKDKSDNEDDKVVEILASKMDELVAVNKSVLKQLEEIRKAQKEILASAPVPPSGSGNSGH RRANLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y335_METJA (Q57781)
Other databases:
- EMBL: L77117 - PIR: G64341 - RefSeq: NP_247308.1 - ProteinModelPortal: Q57781 - GeneID: 1451191 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0335 - NMPDR: fig|243232.1.peg.345 - TIGR: MJ0335 - ProtClustDB: CLSK2749875 - BioCyc: MJAN243232:MJ_0335-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27881; Mature: 27881
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIFLPVLNPTTIDGQEITEEWIKKYGPTLRGKPVNIDHNYYSNGNLAVGDVVDVYFNP CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCEEEEEECC EGNLYAHIRIFDEIYWRLVDNGIKIKGVSFEFNDDGVGEEGIMKGLALCLESDPKVDFAR CCCEEEEEEHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH LVEGNYVLEVLASIKRDSMDTKTQEKTEPKKIKDMTEEEFEKFLHEKIEQILASHKKENE HHCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC DKDKSDNEDDKVVEILASKMDELVAVNKSVLKQLEEIRKAQKEILASAPVPPSGSGNSGH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RRANLGL CCCCCCC >Mature Secondary Structure MQSIFLPVLNPTTIDGQEITEEWIKKYGPTLRGKPVNIDHNYYSNGNLAVGDVVDVYFNP CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCEEEEEECC EGNLYAHIRIFDEIYWRLVDNGIKIKGVSFEFNDDGVGEEGIMKGLALCLESDPKVDFAR CCCEEEEEEHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH LVEGNYVLEVLASIKRDSMDTKTQEKTEPKKIKDMTEEEFEKFLHEKIEQILASHKKENE HHCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC DKDKSDNEDDKVVEILASKMDELVAVNKSVLKQLEEIRKAQKEILASAPVPPSGSGNSGH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RRANLGL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087