| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668503
Identifier: 15668503
GI number: 15668503
Start: 304754
End: 306604
Strand: Reverse
Name: 15668503
Synonym: MJ0329
Alternate gene names: NA
Gene position: 306604-304754 (Counterclockwise)
Preceding gene: 15668504
Following gene: 15668502
Centisome position: 18.41
GC content: 35.39
Gene sequence:
>1851_bases ATGGAAGATGATAAAATTCAAATGGAGACTGTTAGTATTGACTTAGCAAAAGATACTGCTGTAAATATGGCATTGAGAAT CTTATTCACTCAAATCTTTACACCATACTCAATAGTATCAATTGATGGGAAGCAACTATCCAAAGATGTAATTGATGAGA TTTCAGGACTGATTGATAGACACATAAGGGACTTACAATTAGCATTTTCTGATTTTTTACTGAAAGGAAAATGCTACCTC TACAAATTGCATTACATCAATCCGAATTCAATGAACTTTAAGGAAAGGAAACATTGGAATCCACAAAAAGGAAGATATGA GTATTGCATCACATACACAATTAAAAGGAATAATGCCGAAAGATGGTGGGAAGTTGATACAGAAGAGGATGTTAGGGTTG TAATTGCACCAATGGAGCTAAGACAACACTTTCCTGCGGATGTTGAATTTTATGATGAAAAGTATTTGGGAGTATATTAC AATCCAATACCAATACATGAAACAATCCAAGAGATTGCAGACCAAAAAAACACACTTGCTTTAAAAGTATTGCCACTCAT GGTTCAGAAAACCCTAATCCCAACAATTATAGGGATTACTCAAAACACTAAAGCAGGAGAGATAATAAAAAAGGCACTAT CAAATCACCAAAATAGAACCAGAGTATATATTCCTGCAACTCCTGATGAAGTAAAATTTGAAACAATAAGCATAGGAAAA GACATCCCAACTGATTTGATAGAAACAATGCTGTATTACTATGACAGTGCCATATTCATGGGATTGGGGACTTCAATTAG TATTGTAAAAGCATCTGGGCAGGAGCTCACAACATCAAGGACTGTAGATAGGAACATATTAAGAATTGTTCAAGGGTATC AGCAGGAAATTGAAAGATGGATTGCAGACCAGTTAGAAAAAATGGGATACAAAGGCATCTGGGTTAAATTTGCGAATCCA GACCCTGACTGGGAAATTAATATGTTGCAAAAAGCAAAAATGGTTGCAGAATTAAAGGCACAAGAACAGGTAGCCAAATA TGACTTCAGTGCATTGATTGAAAGAATCTTCCCAAGCAATGAATTTGGAGAAATACTTGCGGCATATCCTGATTTAACTG AAAAAGAAGTTGAGAAGCTATTGAAAATGGCAAAAGAGGGTAAAGGAGGTTTAGAATACGCAGATGAAGAAAAACAAAAA TTATTAGAAAAAAAGCGTAAAAGTTTGGAAAAAATAATCAGCAAATTAGAAAAAGTGGGAGATAAGTTCGGCAAAAAATC AATGGAAAATTTTGTAAATTGGATACTTGAAACGTATGAAAGGCTTGGATATAACGAACTTATGCAAGATTGGGATGAAT TATTAAGGGAATTCACTCGAGAAGAAGTGGATATGTTCTTCCTTGACTACGTAGCCCCTACACTCAATTCATTGAAGATA TATGATGACTTAGACCAGCAAACTATTGATATACTAAAACAACATTGGGAACAGGCATTCTACAACATATATTCATCATA TAGCCAACAGTTCCTTGATGTTCTTACAGAGGGAATTCAAAAAGGACTTGGTGAAGAAGAAATTGCAAAGAATCTTAAAA AAGTTGCAAAAGATGTTAAGGGTTCAAGATTGCAGATGAGGGCTCGTGAGGAGATGAACAAAACCTATAATCTGACAAGA GCGAGAAGGTTCTGGAATGACAAGGTAATATATGTCACAATGAAAGATGAAAGAGTTAGACCAAGCCATAGAAAACTGCA TGGGCTCATCTTTGTACCTGCTGAAAGACCTGAATTAGTGCCACCATTAGGATACGGTTGTAGATGCACAATAACACCTG TGAGGGATTAA
Upstream 100 bases:
>100_bases GAATGCAATTGATGAAGAGGATTACTCATACCGCCAAGTGTTTGACGATGAAGAAGAATTTGAGGAATTTGAGTTTGGAA GTTTCTTTTAAGGTGATACT
Downstream 100 bases:
>100_bases AATGCCAAATAATACAAATAATAAATTATGTAAAGTCTGCAACTCTCCACACAGGGCTGAGATAGAAGCATTATATTTCC AGGGCTGGGGAGCTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD
Sequences:
>Translated_616_residues MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD >Mature_616_residues MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD
Specific function: Unknown
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y329_METJA (Q57775)
Other databases:
- EMBL: L77117 - PIR: A64341 - RefSeq: NP_247301.1 - ProteinModelPortal: Q57775 - GeneID: 1451184 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0329 - NMPDR: fig|243232.1.peg.338 - TIGR: MJ0329 - OMA: ERIFPSN - ProtClustDB: CLSK2517573 - BioCyc: MJAN243232:MJ_0329-MONOMER - InterPro: IPR006528 - TIGRFAMs: TIGR01641
Pfam domain/function: PF04233 Phage_Mu_F
EC number: NA
Molecular weight: Translated: 72038; Mature: 72038
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDR CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH HIRDLQLAFSDFLLKGKCYLYKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAE HHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCC RWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYYNPIPIHETIQEIADQKNTLA CCEECCCCCCCEEEEEEHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCEE LKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCC DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERW CCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IADQLEKMGYKGIWVKFANPDPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSN HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQKLLEKKRKSLEKIISKLEKVG HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GSRLQMRAREEMNKTYNLTRARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCEEEEEEEECCCCCCC PPLGYGCRCTITPVRD CCCCCCCEEEEECCCC >Mature Secondary Structure MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDR CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH HIRDLQLAFSDFLLKGKCYLYKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAE HHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCC RWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYYNPIPIHETIQEIADQKNTLA CCEECCCCCCCEEEEEEHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCEE LKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCC DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERW CCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IADQLEKMGYKGIWVKFANPDPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSN HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQKLLEKKRKSLEKIISKLEKVG HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GSRLQMRAREEMNKTYNLTRARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCEEEEEEEECCCCCCC PPLGYGCRCTITPVRD CCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087