Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668483

Identifier: 15668483

GI number: 15668483

Start: 288380

End: 289081

Strand: Reverse

Name: 15668483

Synonym: MJ0308

Alternate gene names: NA

Gene position: 289081-288380 (Counterclockwise)

Preceding gene: 15668484

Following gene: 15668482

Centisome position: 17.36

GC content: 35.9

Gene sequence:

>702_bases
ATGGATGTTAATGAAATAAGAGAAAATGCAAAAAAGTTAATGGAATTGATGATGTTAGATAAACCATTTGTCGCTGTAAA
ATTGGCAAAATCAAAGGAAGAAATTCCAGAAGGCTATGAAACATTAGACGAAGAAAAAAGACACTGTGAAATGATTCAAA
TGGCAAGATTAGAAAGAAAAAAATTATATGCAACAGTTGATAAACACCTCTGTAAGGGAGGAGCTTATGCAATGGGGGTC
TTTAGAAACCCACCAGAACCATTAGCAACAGGAAAATTATATGTCAAATTAGGAAACTTTAAAGATGAAGAGGCAGCTAA
AAAAACAGTTGATGCAATACCAAAAGTTGAAGAGGAAATTTATGCAACAGTCTATGCTCCATTAGATGAAACCGACTTCA
TTCCAGACTCAATTGTATTTATTGGAGAGCCATTATATGCGTTGAGGTTAGTTCAAGCAATACTCTACCATAAAGGTGGA
AGATTCCAGGCAGATTTCTCAGGAATTCAGTCATTGTGTGCTGATGCTGTAGCGGCAGTTTATACAAGAAAAGCTCCTAA
CATGACTTTAGGTTGTAACGGTTCAAGAAAATACGCTGGAATTAAGCCAGAAGAAGTTGTTGTAGCTTTCCCACCAGAGA
AATTGAAGGATATTGTTGAAGCAATTGAACACTTCAGACAAGTTTGGACATGTGGTCATTAA

Upstream 100 bases:

>100_bases
TTAAATTTTTTGTGATTTGGAATTAAATCGAAAAGTATATATACTGGGGAAGTTAATAATATAGTTCGTAAAACATACAC
AACCATTCACAGGTGAGATT

Downstream 100 bases:

>100_bases
TTTTTAGCCTATAATTTAATATTCTATTTTTGGAAAACTATTTATAAAAATTTGGATAAAATTTTTATTATAAACTTAAG
AGGTTTTTAAGGTGTTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV
FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG
RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH

Sequences:

>Translated_233_residues
MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV
FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG
RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH
>Mature_233_residues
MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV
FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG
RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y308_METJA (Q57756)

Other databases:

- EMBL:   L77117
- PIR:   E64338
- RefSeq:   NP_247281.1
- GeneID:   1451163
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0308
- NMPDR:   fig|243232.1.peg.318
- TIGR:   MJ0308
- HOGENOM:   HBG733852
- OMA:   ITFINHS
- ProtClustDB:   CLSK876152
- BioCyc:   MJAN243232:MJ_0308-MONOMER
- InterPro:   IPR003748

Pfam domain/function: PF02596 DUF169

EC number: NA

Molecular weight: Translated: 26245; Mature: 26245

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERK
CCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEI
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
YATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAV
HHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
YTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH
HHCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERK
CCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEI
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
YATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAV
HHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
YTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH
HHCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087