| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668463
Identifier: 15668463
GI number: 15668463
Start: 271216
End: 271752
Strand: Reverse
Name: 15668463
Synonym: MJ0288
Alternate gene names: NA
Gene position: 271752-271216 (Counterclockwise)
Preceding gene: 15668464
Following gene: 15668462
Centisome position: 16.32
GC content: 32.22
Gene sequence:
>537_bases ATGAAAAAATTCTCTGCAATTTTTGGTTTATTATCTGTCATATTTGTCATTATGGCCATTTCACAGGTTAGTGGTTTAAG TGGGGCAATAACTCCACCAAAAATTGATATCATGGTGAATGCAAGCAATGGGCTTCCTCAAGATATAAATAGCATTATTT ATGTAAAAAATCCCAATAGTTTCCCAGTTAAAGTGGAAATGGTTACAACTGGAGATTTAAATAATTCTAAAAAAGTAGAA GTCAAAATTATGAAGAATAACTTTACATTAAAACCAGGAGAAACTGTTGGGGTTAATATCACATTTACTGTAAAGGAAAA GGACAACTATGAAGGAGATATTTTAACGAAAATTAGTCCAGTAGATTATGGAGATGATAAAAAAGGCGTGAATCTAAAAG CGAGTGTAGTTTTGCCTACAAAAGTTGCGATAATGGTAGTTGGTAATGAGATTCATACAAAAGAATTGGTAATTACTGCA GTTTTAATCATCAGCATCTTGGGATTAGGTGCTATGTTGATTAGGAGACATCTCTAA
Upstream 100 bases:
>100_bases ACCATTACCAAGCGGTTGCTATGGAGGTTCAATTACATTCTATGGACTTGGATTATAAATCCCCCAACTTTTTAATTTTT TGATAGTAAGGTGATTACTT
Downstream 100 bases:
>100_bases TTAAACTTCATTTAAACATTTAAATAAAAATAAAATAAAAATGTTTTAAAGTGGTAGTATGAGGATTCCCCCTCCACTCT CAAATAATAAAAATAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKKFSAIFGLLSVIFVIMAISQVSGLSGAITPPKIDIMVNASNGLPQDINSIIYVKNPNSFPVKVEMVTTGDLNNSKKVE VKIMKNNFTLKPGETVGVNITFTVKEKDNYEGDILTKISPVDYGDDKKGVNLKASVVLPTKVAIMVVGNEIHTKELVITA VLIISILGLGAMLIRRHL
Sequences:
>Translated_178_residues MKKFSAIFGLLSVIFVIMAISQVSGLSGAITPPKIDIMVNASNGLPQDINSIIYVKNPNSFPVKVEMVTTGDLNNSKKVE VKIMKNNFTLKPGETVGVNITFTVKEKDNYEGDILTKISPVDYGDDKKGVNLKASVVLPTKVAIMVVGNEIHTKELVITA VLIISILGLGAMLIRRHL >Mature_178_residues MKKFSAIFGLLSVIFVIMAISQVSGLSGAITPPKIDIMVNASNGLPQDINSIIYVKNPNSFPVKVEMVTTGDLNNSKKVE VKIMKNNFTLKPGETVGVNITFTVKEKDNYEGDILTKISPVDYGDDKKGVNLKASVVLPTKVAIMVVGNEIHTKELVITA VLIISILGLGAMLIRRHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y288_METJA (Q57736)
Other databases:
- EMBL: L77117 - PIR: A64336 - RefSeq: NP_247261.1 - ProteinModelPortal: Q57736 - GeneID: 1451143 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0288 - NMPDR: fig|243232.1.peg.298 - TIGR: MJ0288 - OMA: KIDIMVN - ProtClustDB: CLSK2517567 - BioCyc: MJAN243232:MJ_0288-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19266; Mature: 19266
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xae54540)-; HASH(0xb951070)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSAIFGLLSVIFVIMAISQVSGLSGAITPPKIDIMVNASNGLPQDINSIIYVKNPNS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCC FPVKVEMVTTGDLNNSKKVEVKIMKNNFTLKPGETVGVNITFTVKEKDNYEGDILTKISP CCEEEEEEEECCCCCCCEEEEEEEECCEEECCCCEEEEEEEEEEECCCCCCCEEEEEECC VDYGDDKKGVNLKASVVLPTKVAIMVVGNEIHTKELVITAVLIISILGLGAMLIRRHL CCCCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MKKFSAIFGLLSVIFVIMAISQVSGLSGAITPPKIDIMVNASNGLPQDINSIIYVKNPNS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCC FPVKVEMVTTGDLNNSKKVEVKIMKNNFTLKPGETVGVNITFTVKEKDNYEGDILTKISP CCEEEEEEEECCCCCCCEEEEEEEECCEEECCCCEEEEEEEEEEECCCCCCCEEEEEECC VDYGDDKKGVNLKASVVLPTKVAIMVVGNEIHTKELVITAVLIISILGLGAMLIRRHL CCCCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087