| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668414
Identifier: 15668414
GI number: 15668414
Start: 230494
End: 230988
Strand: Direct
Name: 15668414
Synonym: MJ0239
Alternate gene names: NA
Gene position: 230494-230988 (Clockwise)
Preceding gene: 15668413
Following gene: 15668422
Centisome position: 13.84
GC content: 27.68
Gene sequence:
>495_bases GTGAAAAATATGGATGTTTATGAAATACTATACCAATTTTGCTTAGAATATGAAGTATTGTTAGATGATGAAAAAATCCC CCTATGGAAATTAAAAAAAGAAGATTTAGATAAGGTTGATTTAGATTTACCTTGGACTTCTATTAGAGATTTAGCCATCT ATTTATATGAGCTAAAAAAGAAACAACAAAACTCTAAAGAACTTATTAAATGTGATATAGTGGAGATTTTAGTAGGAATT GCTTTATTAAAGCCAGAGGAAGGAAGCAATTACATGGGACTTGTTACGGAAGATATGTGTCTAACATATTTAAGTGAGCT TATAACTGCAAGAATCAACTGTATAGCAAGATACTACTATATGATGAAAAAGCCACAAAACACAAATATATTTGACGAAA TAATATTAAAATTTCCTCAAAAAAAGGACATAAGAGCTTCTAACATAAACGATTTAAGGGAGTTAGTTGGAAAAATTAGA AATTATTTTAAATAA
Upstream 100 bases:
>100_bases CCCAGATTTGGGCTTAAAACTTATTAAAAATTTTGTTGAAAGTGAATATTAACTTCTTAAAATTAGTTAAAAATTTAAAA ATTTCAAAAAGAAATCTTAA
Downstream 100 bases:
>100_bases TCTAAAAACCCATTAAAAATACTGGAATTATTGATAACATCATAACTAAAGCTACAAATATCGCCAATATTTGCCTCTTA CCTATTTTTGTTTTTTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR NYFK
Sequences:
>Translated_164_residues MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR NYFK >Mature_164_residues MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR NYFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y239_METJA (Q57691)
Other databases:
- EMBL: L77117 - PIR: H64329 - RefSeq: NP_247210.1 - GeneID: 1451093 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0239 - NMPDR: fig|243232.1.peg.247 - TIGR: MJ0239 - HOGENOM: HBG539027 - OMA: ITARINC - ProtClustDB: CLSK876124 - BioCyc: MJAN243232:MJ_0239-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19548; Mature: 19548
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKK CCCCHHHHHHHHHHHHHHHEECCCCCCCEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHH KQQNSKELIKCDIVEILVGIALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYY HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIRNYFK HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKK CCCCHHHHHHHHHHHHHHHEECCCCCCCEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHH KQQNSKELIKCDIVEILVGIALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYY HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIRNYFK HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087