| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668378
Identifier: 15668378
GI number: 15668378
Start: 198461
End: 198868
Strand: Reverse
Name: 15668378
Synonym: MJ0206
Alternate gene names: NA
Gene position: 198868-198461 (Counterclockwise)
Preceding gene: 15668380
Following gene: 15668377
Centisome position: 11.94
GC content: 28.43
Gene sequence:
>408_bases ATGGAATTTATTATCAAAGCTAAAGGGCATAAAAATGTCTCAGCTACCCATAAAACAACCTTAGAGATTACAAAAGAGGA TTATTTAACTCCAACAGGACACTGCATTATAGGAATAGATGCAGATAAATCTATGACTGATTTTAGTGAAGAATTTAAGG AAAAGCTTAGAAATGCTAAAAAAATAATTGTAGAGATTGAAGTTGAAGGAATAAAAGACACTATAATTGGAGAGGGGCAT AAAGATTTAATTTTAAACCATCCAACAGACATGGTTATTAGAAAGAGTAATTATATATGCCCAAGAACACTAATGATTAA TGCAAATAAATCAGCAAAAGATATTAATAGAGAGATAGTAAAAAAATTAAAAGAAGGGAAAGAGTTGATTTTTAAGATAA TTGTCTAA
Upstream 100 bases:
>100_bases ACCATGTTACCACCCTGTAGTGTTTTTTATACAGATGTATAGGAAGATATATATGATTATAAATATTATATACCTTTAAA TAATTTTATGAGGGATATTA
Downstream 100 bases:
>100_bases AGGTGAAAAGATGAAGATAAAAGTTGGTGTCTTAGGAGCTACTGGAAGCGTGGGGCAGAGATTTGTCCAATTGTTGGCAG ACCATCCAATGTTTGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MEFIIKAKGHKNVSATHKTTLEITKEDYLTPTGHCIIGIDADKSMTDFSEEFKEKLRNAKKIIVEIEVEGIKDTIIGEGH KDLILNHPTDMVIRKSNYICPRTLMINANKSAKDINREIVKKLKEGKELIFKIIV
Sequences:
>Translated_135_residues MEFIIKAKGHKNVSATHKTTLEITKEDYLTPTGHCIIGIDADKSMTDFSEEFKEKLRNAKKIIVEIEVEGIKDTIIGEGH KDLILNHPTDMVIRKSNYICPRTLMINANKSAKDINREIVKKLKEGKELIFKIIV >Mature_135_residues MEFIIKAKGHKNVSATHKTTLEITKEDYLTPTGHCIIGIDADKSMTDFSEEFKEKLRNAKKIIVEIEVEGIKDTIIGEGH KDLILNHPTDMVIRKSNYICPRTLMINANKSAKDINREIVKKLKEGKELIFKIIV
Specific function: Unknown
COG id: COG2090
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y206_METJA (Q57659)
Other databases:
- EMBL: L77117 - PIR: G64325 - RefSeq: NP_247174.1 - ProteinModelPortal: Q57659 - SMR: Q57659 - GeneID: 1451055 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0206 - NMPDR: fig|243232.1.peg.211 - TIGR: MJ0206 - HOGENOM: HBG541676 - OMA: PRGDCII - ProtClustDB: CLSK876110 - BioCyc: MJAN243232:MJ_0206-MONOMER - InterPro: IPR007171 - InterPro: IPR023131
Pfam domain/function: PF04027 DUF371
EC number: NA
Molecular weight: Translated: 15376; Mature: 15376
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIIKAKGHKNVSATHKTTLEITKEDYLTPTGHCIIGIDADKSMTDFSEEFKEKLRNAK CCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCE KIIVEIEVEGIKDTIIGEGHKDLILNHPTDMVIRKSNYICPRTLMINANKSAKDINREIV EEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHH KKLKEGKELIFKIIV HHHHHHHHHHHEECC >Mature Secondary Structure MEFIIKAKGHKNVSATHKTTLEITKEDYLTPTGHCIIGIDADKSMTDFSEEFKEKLRNAK CCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCE KIIVEIEVEGIKDTIIGEGHKDLILNHPTDMVIRKSNYICPRTLMINANKSAKDINREIV EEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHH KKLKEGKELIFKIIV HHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087