| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668371
Identifier: 15668371
GI number: 15668371
Start: 192373
End: 192570
Strand: Direct
Name: 15668371
Synonym: MJ0199
Alternate gene names: NA
Gene position: 192373-192570 (Clockwise)
Preceding gene: 15668370
Following gene: 15668374
Centisome position: 11.55
GC content: 39.39
Gene sequence:
>198_bases GTGGTAATAATGGCTGTAACAATAGATTACAGCTTATGTAAAGGGGCAGAGTGTGCAGAATGTGTAAATAACTGCCCAAT GGAAGTTTTTGAAATTGAGGGAGATAAAGTAGTTGTTGCAAGACCTGATGACTGCACTTATTGTGGAGTCTGTGAAGATG TCTGTCCAACAGGAGCTGTAAAAGTTGAACCAGAATAA
Upstream 100 bases:
>100_bases TTTAAATTTTAATTATTGTTTTCCGATATCATTTCCGATAATTATATATATCAAGTAGTAATCTTAATCAATTATTAAAT CAATTATTAACATTTTAGAG
Downstream 100 bases:
>100_bases AAGAGCAAATTTAAATTCTTTTCTGTTATTTTGTAAAATCTTTTTTTATTGTTCCATTTCTTCCAATGCTTTAAACAATT CTTCCCAAGCTTCTAAACTT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MVIMAVTIDYSLCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE
Sequences:
>Translated_65_residues MVIMAVTIDYSLCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE >Mature_65_residues MVIMAVTIDYSLCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 6993; Mature: 6993
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 16.9 %Cys+Met (Translated Protein) 12.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 16.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIMAVTIDYSLCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAV CEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEE KVEPE EECCC >Mature Secondary Structure MVIMAVTIDYSLCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAV CEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEE KVEPE EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]