| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668308
Identifier: 15668308
GI number: 15668308
Start: 135116
End: 136564
Strand: Reverse
Name: 15668308
Synonym: MJ0138
Alternate gene names: NA
Gene position: 136564-135116 (Counterclockwise)
Preceding gene: 15668311
Following gene: 15668307
Centisome position: 8.2
GC content: 29.54
Gene sequence:
>1449_bases ATGGAAATTGGTATTTTGGATATTAAGGGGTCTCTTCCATTATTTGAAGATTTCGGCAATCTACCAACAAAGATTATAAC TGAAAATAATTATAAAGAAATTAAAGATTTAGATGCTTTGATAATACCTGGAGGAAGTTTAATTGAAAGTAAATCATTAA ATGATGATTTAAAAAAAGAAATAATTAACTTTAATGGGTATATAATTGGCATTTGCAGTGGTTTTCAGATATTAGCTAAA AAGATAGACATTGGAAGAAAAAGCAGCGTTCCAATAATTAAAGAGGGCTTAGGTTTGTTGGATGTTGAGTTTTCTCCATT AGTTTGCACAGATAGAGTAGAATTTGAAGTAAAAAAATCAATATTTGGAGAGGGAAAGGGAGAAGGGTTTCACTGCCATA CTTATGGAAATATTGAGGTAGTTGATAAAGAAACTAAAATTCTAACAGTTTCAAAAGTAAAAAAGCTAAATTATAAACTT GGAGCTGAAAAAGAAATTATCTCTGGAGCTTTTAAAGGAAAAGTGTTTGGAACAATGGTTCATAACTTCTTAGATAATGA ATTTGTCAGAGACAATTTTTTAAAACATTTGGGAGTTACAGAGGATGAGAAAGAGGAAATATTTGAAAAAAATAAGATTA TAAAAGATGAATTAAAAAAGAGGGCTTTAAAATATAGATTAAACCCAAAATTACTAAAAGAGAATAATAAAAAAGATGTT AATAAAAAAAGAGGGATTATTTTATTGGCAACATCATCAAACAGTGGAAAGACGTTTTTAACAACTGCTTTATCATCAAA ATTAAATGGAAGAGTTTTTGTTGCTAAGATTGGCGGGGATGTTAGGGATATAGTGCCAGCTCTTTATTTATTGAGAGAGA AGATGACAAAATACAACAGCATAAAGATTGGAGAGAGAGGATGGGTTGATGTTTCTAAATTTTTAGATTATATAAAAAAG TCAGATTATGATTACATAATTGTTGAAGGGGTTATGGGAGCTTTTACTGCAGCATTAAAAAATATTTCCTCTTATCAAAT AGCCAAAAAGCTTGGATTTCCAGTTTATATAGTAAGTGCTTGCAATATAAGTGGGATAGAGGGAGCTTTTGTAGAGGCAA TGGCTTATTACAGCCTACTCAAAGATATTGGGATTAAAGTTGAAGGAGTAATTTTAAATAAAGTCTATGATTGGAACTCT TTCAATAAATTAAAAAGTTTGGCTGAAAAACATAACATAAAGCTCTATGGAGTTGGAAAAATAGCTAATGAGAGTAGGGG ACTAATTCCAGAAGTAGAGATTGATTATGAAAGCTTCTGCAGAAATGCCTTTAATGTTGATTTAGAAATAGAAATCCCAG AGGTTGAAATAAATAATCATATAAAGGATGAGGAAGATAACTTTTTAGAGAGGTTAGATAATTGGATGGAAAATATTAAT AAATATTAA
Upstream 100 bases:
>100_bases TAAACTCAATACTTCCATTATTTTCTTTAACCGCCTATCTTTTAAGTTCATTTATATCCCAATTTGAAATTTTTATAACA AATATTTTTGGTGATATCCA
Downstream 100 bases:
>100_bases TTTAAGAGGCATTGCCGAGCGTAAGCGAGGCAATGCATCCCGGGTATACCAATAGGGCGATAGCCCTATGGGGAGATAAC TTTTTAGAGAGGTTAGATAA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MEIGILDIKGSLPLFEDFGNLPTKIITENNYKEIKDLDALIIPGGSLIESKSLNDDLKKEIINFNGYIIGICSGFQILAK KIDIGRKSSVPIIKEGLGLLDVEFSPLVCTDRVEFEVKKSIFGEGKGEGFHCHTYGNIEVVDKETKILTVSKVKKLNYKL GAEKEIISGAFKGKVFGTMVHNFLDNEFVRDNFLKHLGVTEDEKEEIFEKNKIIKDELKKRALKYRLNPKLLKENNKKDV NKKRGIILLATSSNSGKTFLTTALSSKLNGRVFVAKIGGDVRDIVPALYLLREKMTKYNSIKIGERGWVDVSKFLDYIKK SDYDYIIVEGVMGAFTAALKNISSYQIAKKLGFPVYIVSACNISGIEGAFVEAMAYYSLLKDIGIKVEGVILNKVYDWNS FNKLKSLAEKHNIKLYGVGKIANESRGLIPEVEIDYESFCRNAFNVDLEIEIPEVEINNHIKDEEDNFLERLDNWMENIN KY
Sequences:
>Translated_482_residues MEIGILDIKGSLPLFEDFGNLPTKIITENNYKEIKDLDALIIPGGSLIESKSLNDDLKKEIINFNGYIIGICSGFQILAK KIDIGRKSSVPIIKEGLGLLDVEFSPLVCTDRVEFEVKKSIFGEGKGEGFHCHTYGNIEVVDKETKILTVSKVKKLNYKL GAEKEIISGAFKGKVFGTMVHNFLDNEFVRDNFLKHLGVTEDEKEEIFEKNKIIKDELKKRALKYRLNPKLLKENNKKDV NKKRGIILLATSSNSGKTFLTTALSSKLNGRVFVAKIGGDVRDIVPALYLLREKMTKYNSIKIGERGWVDVSKFLDYIKK SDYDYIIVEGVMGAFTAALKNISSYQIAKKLGFPVYIVSACNISGIEGAFVEAMAYYSLLKDIGIKVEGVILNKVYDWNS FNKLKSLAEKHNIKLYGVGKIANESRGLIPEVEIDYESFCRNAFNVDLEIEIPEVEINNHIKDEEDNFLERLDNWMENIN KY >Mature_482_residues MEIGILDIKGSLPLFEDFGNLPTKIITENNYKEIKDLDALIIPGGSLIESKSLNDDLKKEIINFNGYIIGICSGFQILAK KIDIGRKSSVPIIKEGLGLLDVEFSPLVCTDRVEFEVKKSIFGEGKGEGFHCHTYGNIEVVDKETKILTVSKVKKLNYKL GAEKEIISGAFKGKVFGTMVHNFLDNEFVRDNFLKHLGVTEDEKEEIFEKNKIIKDELKKRALKYRLNPKLLKENNKKDV NKKRGIILLATSSNSGKTFLTTALSSKLNGRVFVAKIGGDVRDIVPALYLLREKMTKYNSIKIGERGWVDVSKFLDYIKK SDYDYIIVEGVMGAFTAALKNISSYQIAKKLGFPVYIVSACNISGIEGAFVEAMAYYSLLKDIGIKVEGVILNKVYDWNS FNKLKSLAEKHNIKLYGVGKIANESRGLIPEVEIDYESFCRNAFNVDLEIEIPEVEINNHIKDEEDNFLERLDNWMENIN KY
Specific function: Unknown
COG id: COG1492
COG function: function code H; Cobyric acid synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y138_METJA (Q57602)
Other databases:
- EMBL: L77117 - PIR: B64317 - RefSeq: NP_247104.1 - ProteinModelPortal: Q57602 - SMR: Q57602 - GeneID: 1450979 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0138 - NMPDR: fig|243232.1.peg.141 - TIGR: MJ0138 - HOGENOM: HBG540961 - OMA: FHCHTYG - ProtClustDB: PRK06278 - BioCyc: MJAN243232:MJ_0138-MONOMER - InterPro: IPR002586 - InterPro: IPR017926 - InterPro: IPR011698
Pfam domain/function: PF01656 CbiA; PF07685 GATase_3
EC number: NA
Molecular weight: Translated: 54465; Mature: 54465
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGILDIKGSLPLFEDFGNLPTKIITENNYKEIKDLDALIIPGGSLIESKSLNDDLKKE CCEEEEEECCCCCHHHHHCCCCCEEEECCCHHHHHCCCEEEECCCCEECCCCCCHHHHHH IINFNGYIIGICSGFQILAKKIDIGRKSSVPIIKEGLGLLDVEFSPLVCTDRVEFEVKKS HHCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCEEEECCCCEEECCCCHHHHHHH IFGEGKGEGFHCHTYGNIEVVDKETKILTVSKVKKLNYKLGAEKEIISGAFKGKVFGTMV HCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH HNFLDNEFVRDNFLKHLGVTEDEKEEIFEKNKIIKDELKKRALKYRLNPKLLKENNKKDV HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC NKKRGIILLATSSNSGKTFLTTALSSKLNGRVFVAKIGGDVRDIVPALYLLREKMTKYNS HHHCCEEEEEECCCCCCEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC IKIGERGWVDVSKFLDYIKKSDYDYIIVEGVMGAFTAALKNISSYQIAKKLGFPVYIVSA EEECCCCCEEHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEE CNISGIEGAFVEAMAYYSLLKDIGIKVEGVILNKVYDWNSFNKLKSLAEKHNIKLYGVGK CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHCCEEEEEECE IANESRGLIPEVEIDYESFCRNAFNVDLEIEIPEVEINNHIKDEEDNFLERLDNWMENIN ECCCCCCCCCEEEECHHHHCCHHCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHC KY CC >Mature Secondary Structure MEIGILDIKGSLPLFEDFGNLPTKIITENNYKEIKDLDALIIPGGSLIESKSLNDDLKKE CCEEEEEECCCCCHHHHHCCCCCEEEECCCHHHHHCCCEEEECCCCEECCCCCCHHHHHH IINFNGYIIGICSGFQILAKKIDIGRKSSVPIIKEGLGLLDVEFSPLVCTDRVEFEVKKS HHCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCEEEECCCCEEECCCCHHHHHHH IFGEGKGEGFHCHTYGNIEVVDKETKILTVSKVKKLNYKLGAEKEIISGAFKGKVFGTMV HCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH HNFLDNEFVRDNFLKHLGVTEDEKEEIFEKNKIIKDELKKRALKYRLNPKLLKENNKKDV HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC NKKRGIILLATSSNSGKTFLTTALSSKLNGRVFVAKIGGDVRDIVPALYLLREKMTKYNS HHHCCEEEEEECCCCCCEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC IKIGERGWVDVSKFLDYIKKSDYDYIIVEGVMGAFTAALKNISSYQIAKKLGFPVYIVSA EEECCCCCEEHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEE CNISGIEGAFVEAMAYYSLLKDIGIKVEGVILNKVYDWNSFNKLKSLAEKHNIKLYGVGK CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHCCEEEEEECE IANESRGLIPEVEIDYESFCRNAFNVDLEIEIPEVEINNHIKDEEDNFLERLDNWMENIN ECCCCCCCCCEEEECHHHHCCHHCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHC KY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087