| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668256
Identifier: 15668256
GI number: 15668256
Start: 79630
End: 80751
Strand: Direct
Name: 15668256
Synonym: MJ0085
Alternate gene names: NA
Gene position: 79630-80751 (Clockwise)
Preceding gene: 15668255
Following gene: 15668257
Centisome position: 4.78
GC content: 35.29
Gene sequence:
>1122_bases ATGTTAAAGAAATTAATAGGTTTATTAACAATTCTAATTATTGCCGTAGGGTTTTGTGGATGTATGGAGCAGAATATAGA AAAACAAACTCCAACTGCAAGTGAAGCTCCTAACACCATAAAAGTTGTTGATTTGTATGGTAGAGAGGTTGAAGTGCCTA AAGAAGTTAATAGGATTGTATGCTGTGGTCCAGGATGTTTAAGACTTATTGTCTATCTAAACGCAACGGATAAGGTTGTT GGAGTTGAAGATACTGAGAAGAAATGGACTCCATGGACAAGACCTTATAGAATTGCACATCCAGAGCTTGCTAACTTACC AACAATAGGGCAAGGAGGGCCTTGTCCAAAACCAAACCCAGAGGCTATAATTCAGGTCAAACCAGATGTAATATTTGTTA CATACATGCCAAAGGATGAAGTTGATGCATTACAGCAAAAAACTGGTATTCCAGTAGTTGTTTTAAGCTATGGGCAGTTG GCAACATTCAACAACGAAGATTTATTTAAATCATTAGAGCTTGCAGGAAAAATATTGGGCAAAGAAGAGAGAGCTAAGGA GGTTATTGAATTTATAAAGAACTGCCAAAATGATTTAAATGAGAGAACAAAAGATATTCCAGACGATAAGAAGCCAAGTG TCTATGTTGGAGGTATTGGATACAAAGGACTGCATGGAATTGACAGCACTGAGTGCAAATATCCACCATTTGTTGCTGTT AATGCAAAGAACGTTGCAGATGAGTTGGGTAAAGAGGGGCATGTATTTGTTACTAAGGAGCAAATTCTAAAATGGAATCC AGATATAATATTCATTGATGAAGGAGGATTGAAGTTAGTTGTTGAAGACTATAAGAGAAATAAAGAATTTTACAACTCAT TAAAGGCATTTAAGAATGGAGATGTTTATGGTTTATTGCCATATAACTTCTACACAACAAATATAGGAACAGCTCTTGCT GATGCTTATTATATAGGAAAAGTAGTTTATCCAGATAGATTTAAAGATATAGACCCAGAACAAAAAGCAGATGAGATATT TACCTTCTTGGTTGGAAAGCCAGTTTATAAAGAGATGAAAGAGAAATTGGGAGGATTTAAGAAATTAGAGTTTAGCAGCT AA
Upstream 100 bases:
>100_bases TTGATGTATTTTTAACGATTATTTTTGATAAACTACCGAAAAATATATATTAGATATTAAAAATTTTTGTTCATATCATA TAGCCTAAAATGGTGACAAT
Downstream 100 bases:
>100_bases TTTTTAATTTTTTATAATTTTTATTTTGGTGATAAAATGCTTTTAAAATCTCCAGATAAAAGCCCAGAGAAGATATTGAA GCTTTTTGATGAAGTTTATT
Product: iron transport periplasmic binding protein CeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MLKKLIGLLTILIIAVGFCGCMEQNIEKQTPTASEAPNTIKVVDLYGREVEVPKEVNRIVCCGPGCLRLIVYLNATDKVV GVEDTEKKWTPWTRPYRIAHPELANLPTIGQGGPCPKPNPEAIIQVKPDVIFVTYMPKDEVDALQQKTGIPVVVLSYGQL ATFNNEDLFKSLELAGKILGKEERAKEVIEFIKNCQNDLNERTKDIPDDKKPSVYVGGIGYKGLHGIDSTECKYPPFVAV NAKNVADELGKEGHVFVTKEQILKWNPDIIFIDEGGLKLVVEDYKRNKEFYNSLKAFKNGDVYGLLPYNFYTTNIGTALA DAYYIGKVVYPDRFKDIDPEQKADEIFTFLVGKPVYKEMKEKLGGFKKLEFSS
Sequences:
>Translated_373_residues MLKKLIGLLTILIIAVGFCGCMEQNIEKQTPTASEAPNTIKVVDLYGREVEVPKEVNRIVCCGPGCLRLIVYLNATDKVV GVEDTEKKWTPWTRPYRIAHPELANLPTIGQGGPCPKPNPEAIIQVKPDVIFVTYMPKDEVDALQQKTGIPVVVLSYGQL ATFNNEDLFKSLELAGKILGKEERAKEVIEFIKNCQNDLNERTKDIPDDKKPSVYVGGIGYKGLHGIDSTECKYPPFVAV NAKNVADELGKEGHVFVTKEQILKWNPDIIFIDEGGLKLVVEDYKRNKEFYNSLKAFKNGDVYGLLPYNFYTTNIGTALA DAYYIGKVVYPDRFKDIDPEQKADEIFTFLVGKPVYKEMKEKLGGFKKLEFSS >Mature_373_residues MLKKLIGLLTILIIAVGFCGCMEQNIEKQTPTASEAPNTIKVVDLYGREVEVPKEVNRIVCCGPGCLRLIVYLNATDKVV GVEDTEKKWTPWTRPYRIAHPELANLPTIGQGGPCPKPNPEAIIQVKPDVIFVTYMPKDEVDALQQKTGIPVVVLSYGQL ATFNNEDLFKSLELAGKILGKEERAKEVIEFIKNCQNDLNERTKDIPDDKKPSVYVGGIGYKGLHGIDSTECKYPPFVAV NAKNVADELGKEGHVFVTKEQILKWNPDIIFIDEGGLKLVVEDYKRNKEFYNSLKAFKNGDVYGLLPYNFYTTNIGTALA DAYYIGKVVYPDRFKDIDPEQKADEIFTFLVGKPVYKEMKEKLGGFKKLEFSS
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y085_METJA (Q57550)
Other databases:
- EMBL: L77117 - PIR: E64310 - RefSeq: NP_247049.1 - ProteinModelPortal: Q57550 - SMR: Q57550 - GeneID: 1450924 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0085 - NMPDR: fig|243232.1.peg.86 - TIGR: MJ0085 - HOGENOM: HBG540374 - OMA: YIFIDEG - ProtClustDB: CLSK2517548 - BioCyc: MJAN243232:MJ_0085-MONOMER - InterPro: IPR002491
Pfam domain/function: PF01497 Peripla_BP_2
EC number: NA
Molecular weight: Translated: 41813; Mature: 41813
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS50983 FE_B12_PBP; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKLIGLLTILIIAVGFCGCMEQNIEKQTPTASEAPNTIKVVDLYGREVEVPKEVNRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHCCEEE CCGPGCLRLIVYLNATDKVVGVEDTEKKWTPWTRPYRIAHPELANLPTIGQGGPCPKPNP EECCHHEEEEEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC EAIIQVKPDVIFVTYMPKDEVDALQQKTGIPVVVLSYGQLATFNNEDLFKSLELAGKILG CEEEEECCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHC KEERAKEVIEFIKNCQNDLNERTKDIPDDKKPSVYVGGIGYKGLHGIDSTECKYPPFVAV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEE NAKNVADELGKEGHVFVTKEQILKWNPDIIFIDEGGLKLVVEDYKRNKEFYNSLKAFKNG EHHHHHHHCCCCCCEEEEHHHHHCCCCCEEEECCCCCEEEEHHHHCCHHHHHHHHHHCCC DVYGLLPYNFYTTNIGTALADAYYIGKVVYPDRFKDIDPEQKADEIFTFLVGKPVYKEMK CEEEEECCCEEECCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH EKLGGFKKLEFSS HHHCCCCEECCCC >Mature Secondary Structure MLKKLIGLLTILIIAVGFCGCMEQNIEKQTPTASEAPNTIKVVDLYGREVEVPKEVNRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHCCEEE CCGPGCLRLIVYLNATDKVVGVEDTEKKWTPWTRPYRIAHPELANLPTIGQGGPCPKPNP EECCHHEEEEEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC EAIIQVKPDVIFVTYMPKDEVDALQQKTGIPVVVLSYGQLATFNNEDLFKSLELAGKILG CEEEEECCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHC KEERAKEVIEFIKNCQNDLNERTKDIPDDKKPSVYVGGIGYKGLHGIDSTECKYPPFVAV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEE NAKNVADELGKEGHVFVTKEQILKWNPDIIFIDEGGLKLVVEDYKRNKEFYNSLKAFKNG EHHHHHHHCCCCCCEEEEHHHHHCCCCCEEEECCCCCEEEEHHHHCCHHHHHHHHHHCCC DVYGLLPYNFYTTNIGTALADAYYIGKVVYPDRFKDIDPEQKADEIFTFLVGKPVYKEMK CEEEEECCCEEECCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH EKLGGFKKLEFSS HHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087