| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668249
Identifier: 15668249
GI number: 15668249
Start: 72051
End: 72674
Strand: Reverse
Name: 15668249
Synonym: MJ0078
Alternate gene names: NA
Gene position: 72674-72051 (Counterclockwise)
Preceding gene: 15668250
Following gene: 15668247
Centisome position: 4.36
GC content: 26.44
Gene sequence:
>624_bases ATGAACTGTGAAGAATATAGAAAGAAATTAAAACTAAATTATGGAAATAGAGAAAAATTAAAGGTTTTGAAGGAACTATA TCAAATGGAAGTTGATGAGATAACAAAGTTAAACATTTTAGATGATGTTTTTGAGTTATTGACATCAACGAAGGAGAGGG GGTTTGAGGATATAATATCTACACACTACACTTCTGACTCAAAGAATAAGGCTATTATATATTATTGCATAAAAATTATA GAAAAAGTTGGCATTAAATATCCAAATTTGGTTTATATTTATATTCCTTATTTAATAAAACTCTTAGATAGTGAGTTTGA ATGCATTAGATTTGCAAGTGCTGAGGCTTTGGCAAACATCCCTTCAAAACTAACAATCTATGCATATCCAAAACTTATAA AGAAATTGGATAATGAAGTTTATGCCAAAGTGCTGGTTAAGTTAATCATGAAATCAGATAATAAGGAGGCAATTTTATTA AAACTTTTTGAAAATTTTAACGAATATTCTCTCTATGTGATAAAAGAGCTTTATAAATATGATAAGGAGTTAGTTTATGA ATTTATCCCATTAATTTTAAAAGAGTTTGGAAATAATGGTTTATATAGTTTTTTGCAAAAGTAA
Upstream 100 bases:
>100_bases ATAAGGAATGAAGCTATAATAAACAAAAGAAAAACTGACTTTATTGATGAGGTAATTAAAGAGACGGATGAATTTAATAA TTATATTGAAGGGATTTTAA
Downstream 100 bases:
>100_bases TTAAAATTATAAAGGAAAATTGAACGCCTTCAATAAGAAGGCGTTCATTATAACCTTATGTATTTCAAGATGTTTGCAAA AAACTATAATTATGATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNCEEYRKKLKLNYGNREKLKVLKELYQMEVDEITKLNILDDVFELLTSTKERGFEDIISTHYTSDSKNKAIIYYCIKII EKVGIKYPNLVYIYIPYLIKLLDSEFECIRFASAEALANIPSKLTIYAYPKLIKKLDNEVYAKVLVKLIMKSDNKEAILL KLFENFNEYSLYVIKELYKYDKELVYEFIPLILKEFGNNGLYSFLQK
Sequences:
>Translated_207_residues MNCEEYRKKLKLNYGNREKLKVLKELYQMEVDEITKLNILDDVFELLTSTKERGFEDIISTHYTSDSKNKAIIYYCIKII EKVGIKYPNLVYIYIPYLIKLLDSEFECIRFASAEALANIPSKLTIYAYPKLIKKLDNEVYAKVLVKLIMKSDNKEAILL KLFENFNEYSLYVIKELYKYDKELVYEFIPLILKEFGNNGLYSFLQK >Mature_207_residues MNCEEYRKKLKLNYGNREKLKVLKELYQMEVDEITKLNILDDVFELLTSTKERGFEDIISTHYTSDSKNKAIIYYCIKII EKVGIKYPNLVYIYIPYLIKLLDSEFECIRFASAEALANIPSKLTIYAYPKLIKKLDNEVYAKVLVKLIMKSDNKEAILL KLFENFNEYSLYVIKELYKYDKELVYEFIPLILKEFGNNGLYSFLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y078_METJA (Q60385)
Other databases:
- EMBL: L77117 - PIR: F64309 - RefSeq: NP_247042.1 - ProteinModelPortal: Q60385 - GeneID: 1450917 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0078 - NMPDR: fig|243232.1.peg.79 - TIGR: MJ0078 - OMA: GFEDIIS - ProtClustDB: CLSK2517545 - BioCyc: MJAN243232:MJ_0078-MONOMER - GO: GO:0005488 - InterPro: IPR011989 - Gene3D: G3DSA:1.25.10.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24563; Mature: 24563
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCEEYRKKLKLNYGNREKLKVLKELYQMEVDEITKLNILDDVFELLTSTKERGFEDIIS CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH THYTSDSKNKAIIYYCIKIIEKVGIKYPNLVYIYIPYLIKLLDSEFECIRFASAEALANI HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PSKLTIYAYPKLIKKLDNEVYAKVLVKLIMKSDNKEAILLKLFENFNEYSLYVIKELYKY CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH DKELVYEFIPLILKEFGNNGLYSFLQK HHHHHHHHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MNCEEYRKKLKLNYGNREKLKVLKELYQMEVDEITKLNILDDVFELLTSTKERGFEDIIS CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH THYTSDSKNKAIIYYCIKIIEKVGIKYPNLVYIYIPYLIKLLDSEFECIRFASAEALANI HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PSKLTIYAYPKLIKKLDNEVYAKVLVKLIMKSDNKEAILLKLFENFNEYSLYVIKELYKY CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH DKELVYEFIPLILKEFGNNGLYSFLQK HHHHHHHHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087