| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668212
Identifier: 15668212
GI number: 15668212
Start: 41880
End: 42527
Strand: Reverse
Name: 15668212
Synonym: MJ0042
Alternate gene names: NA
Gene position: 42527-41880 (Counterclockwise)
Preceding gene: 15668214
Following gene: 15668211
Centisome position: 2.55
GC content: 31.64
Gene sequence:
>648_bases ATGAATGTGAAATGTCCAGAATGTGGGGCATGGATATATGTTGTTGAAGAAGATAGTGGGGGAGACGCTATGGAAGTAAA ATGCCCTAAATGTGGGACTTCAATATACGTAGTAAAACCTATGGGTGAGAAAATGAAAAATAAAAGAGATAAAGATTTTT TAGATGTAAAAATACTTGAAATAGAGGAAACAAAGAAAACTTCACCATATAAAGATACAAAATCTGAGGATGTATTAAAA GCCCTTAGAGTAAAAGCAAACATAAATGGAGAAATATATGAATTCAGAATATGGCAAATTGCTAAAAAACCAGAATATAG AGGAATGGTATATGTAGTTAAATCCGTATCTCACTATTGTGGTAGTGTCAAAACTAAAAATTTCCAAGTTGATGAAGATA ACGATATATACGTAAAGCAAAAATTTGGTATTATTGAGGGAGTTAATAAAAGTAAAATAAAGCTACCAAAAGAAAGAATG GAAGAGATAGCAGAAAAATTAGGATTTGAGCTTAAAGAGGGAGATGAAGGACTAAGGTTATACTTAGGAGAGAAATATTC AGAAAATCCACCATTATCACAAAGACCGGAGTTAATTGAAAAGCTTATAAAGTGTTGGATTGCATTTTGGGAGCCAACAA TGATTTAA
Upstream 100 bases:
>100_bases TAAGATACAAAAAAGATACCGAAAAGTTTATATATTAGATAACCTAAGGTATTATCTGAGAATGAAAAGGTAATGAAAAG GTAAAGTTAGGTGATACCTT
Downstream 100 bases:
>100_bases AACTTACTTAATTTTTAATATTAACTATATTATGAACTATCATGGCTAGTATAATAAATAAGCAAATAATAAGTCCAACG GGGAGAAACATGGAGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI
Sequences:
>Translated_215_residues MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI >Mature_215_residues MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y042_METJA (Q60347)
Other databases:
- EMBL: L77117 - PIR: B64305 - RefSeq: NP_247005.1 - ProteinModelPortal: Q60347 - GeneID: 1450880 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0042 - NMPDR: fig|243232.1.peg.42 - TIGR: MJ0042 - BioCyc: MJAN243232:MJ_0042-MONOMER - InterPro: IPR011723 - TIGRFAMs: TIGR02098
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24892; Mature: 24892
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILE CCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEE IEETKKTSPYKDTKSEDVLKALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYC EECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHH GSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERMEEIAEKLGFELKEGDEGLRL CCCCCCCEEECCCCCEEEEEECCEEECCCCCCEECCHHHHHHHHHHHCCEECCCCCCEEE YLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILE CCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEE IEETKKTSPYKDTKSEDVLKALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYC EECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHH GSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERMEEIAEKLGFELKEGDEGLRL CCCCCCCEEECCCCCEEEEEECCEEECCCCCCEECCHHHHHHHHHHHCCEECCCCCCEEE YLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087