| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668184
Identifier: 15668184
GI number: 15668184
Start: 14348
End: 14836
Strand: Reverse
Name: 15668184
Synonym: MJ0013
Alternate gene names: NA
Gene position: 14836-14348 (Counterclockwise)
Preceding gene: 15668185
Following gene: 15668178
Centisome position: 0.89
GC content: 31.29
Gene sequence:
>489_bases ATGCCAAAGAAAAAGAATAAACTCCCAACCGAAATTGTATTGACTTATAAGGTTAAACACAACCACGATTTAAAAAACTT ACCTGATGAGTTTATAAAAATCTCTCAAAGAGCTATCGATATTATTTGGGAAAACATCAACTGGAAGGAAAAGGTAGTTA AACATCGATACAAAATAGGAAAGAAGAAATACAAATATTACACAACTACTCGACTAATCCCTAAAATTCCAAAGGACAAT GATTTCAAAAGAGAGTTGAGAAATCGTTTATTAGAGGGCTGGGAGTTTGCCTCTCACTATGTCGATGGAGCTATTAAGAC AGCTTATTCAGCAATAGAGAGTTGGAAATCAAACTATTTAAACGTTAATAGAAAGAAAAATAAACCGATATTCAAAAGAC CTTTTGTTAGAGTTAAAACTACCTTGATGAAATACGATAGAAAGAATGGGATTATAAGAATTACAATAAAACCGAGAAAG AGTATTTAA
Upstream 100 bases:
>100_bases ATAACAATCGTTTCTCACTTTGCTGGAAAACTTTACGGAATGCATTCTCATAAGTATAAAAAGCTTACAAAAACAGTTAA AGAAATCGTAAGGGAGGAGG
Downstream 100 bases:
>100_bases TTTTAAACATTAAAGATGAGTGGTTTTTCGAAAGAGTTAAAAAATTTTAACATTGGAGAAGTTATTTTAAAGAATAACGA GGCATTAATAACCTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPKKKNKLPTEIVLTYKVKHNHDLKNLPDEFIKISQRAIDIIWENINWKEKVVKHRYKIGKKKYKYYTTTRLIPKIPKDN DFKRELRNRLLEGWEFASHYVDGAIKTAYSAIESWKSNYLNVNRKKNKPIFKRPFVRVKTTLMKYDRKNGIIRITIKPRK SI
Sequences:
>Translated_162_residues MPKKKNKLPTEIVLTYKVKHNHDLKNLPDEFIKISQRAIDIIWENINWKEKVVKHRYKIGKKKYKYYTTTRLIPKIPKDN DFKRELRNRLLEGWEFASHYVDGAIKTAYSAIESWKSNYLNVNRKKNKPIFKRPFVRVKTTLMKYDRKNGIIRITIKPRK SI >Mature_161_residues PKKKNKLPTEIVLTYKVKHNHDLKNLPDEFIKISQRAIDIIWENINWKEKVVKHRYKIGKKKYKYYTTTRLIPKIPKDND FKRELRNRLLEGWEFASHYVDGAIKTAYSAIESWKSNYLNVNRKKNKPIFKRPFVRVKTTLMKYDRKNGIIRITIKPRKS I
Specific function: Unknown
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y013_METJA (Q60321)
Other databases:
- EMBL: L77117 - PIR: E64301 - RefSeq: NP_246976.1 - GeneID: 1450851 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0013 - NMPDR: fig|243232.1.peg.13 - TIGR: MJ0013 - BioCyc: MJAN243232:MJ_0013-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19588; Mature: 19457
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKKNKLPTEIVLTYKVKHNHDLKNLPDEFIKISQRAIDIIWENINWKEKVVKHRYKIG CCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC KKKYKYYTTTRLIPKIPKDNDFKRELRNRLLEGWEFASHYVDGAIKTAYSAIESWKSNYL HHHHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE NVNRKKNKPIFKRPFVRVKTTLMKYDRKNGIIRITIKPRKSI ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure PKKKNKLPTEIVLTYKVKHNHDLKNLPDEFIKISQRAIDIIWENINWKEKVVKHRYKIG CCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC KKKYKYYTTTRLIPKIPKDNDFKRELRNRLLEGWEFASHYVDGAIKTAYSAIESWKSNYL HHHHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE NVNRKKNKPIFKRPFVRVKTTLMKYDRKNGIIRITIKPRKSI ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087