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The map label for this gene is yjiM [C]

Identifier: 15668179

GI number: 15668179

Start: 8884

End: 10005

Strand: Direct

Name: yjiM [C]

Synonym: MJ0007

Alternate gene names: 15668179

Gene position: 8884-10005 (Clockwise)

Preceding gene: 15668176

Following gene: 15668180

Centisome position: 0.53

GC content: 34.49

Gene sequence:

>1122_bases
ATGATGAAATTAAAGGCAATTGAAAAGTTGATGCAAAAATTCGCCAGTAGAAAAGAACAGCTATATAAGCAAAAAGAAGA
AGGTAGAAAAGTTTTTGGAATGTTCTGTGCCTATGTTCCAATAGAAATAATTTTAGCAGCAAATGCAATCCCAGTTGGTT
TGTGTGGAGGTAAAAATGACACAATCCCAATAGCAGAGGAGGATTTGCCAAGAAACCTATGCCCATTAATAAAATCATCC
TATGGTTTTAAGAAGGCAAAAACCTGCCCTTACTTTGAAGCATCTGATATAGTTATTGGAGAAACTACCTGTGAAGGAAA
GAAGAAGATGTTTGAGTTGATGGAGAGATTGGTGCCAATGCATATAATGCACCTCCCACACATGAAAGATGAAGATTCTT
TGAAAATCTGGATTAAAGAAGTTGAAAAGCTAAAAGAATTGGTTGAGAAAGAGACTGGAAATAAAATAACAGAGGAAAAG
TTAAAAGAGACAGTTGATAAAGTAAATAAAGTTAGGGAGTTGTTTTATAAACTCTATGAATTGAGGAAGAATAAACCAGC
TCCAATTAAGGGTTTAGATGTTTTAAAATTATTCCAGTTTGCCTATTTATTGGATATTGATGACACAATAGGGATTTTAG
AGGATTTAATTGAGGAGTTAGAGGAGAGAGTTAAAAAAGGAGAAGGTTATGAAGGAAAGAGAATTTTAATAACTGGCTGT
CCAATGGTTGCTGGAAACAATAAGATTGTTGAAATTATTGAGGAAGTTGGAGGAGTAGTTGTTGGTGAAGAAAGCTGCAC
TGGAACAAGATTCTTTGAAAACTTTGTTGAGGGCTATAGCGTAGAGGACATTGCAAAAAGATACTTTAAAATCCCATGTG
CTTGTAGATTTAAAAACGATGAGAGAGTTGAAAATATAAAGAGATTGGTTAAAGAGTTGGACGTCGATGGAGTTGTTTAT
TACACTTTGCAGTATTGCCATACATTTAACATAGAGGGAGCTAAGGTAGAGGAGGCATTAAAAGAGGAGGGCATTCCAAT
TATAAGAATTGAAACTGACTATTCTGAAAGTGATAGAGAGCAGTTAAAAACAAGGTTGGAGGCATTTATTGAGATGATTT
AA

Upstream 100 bases:

>100_bases
TTAGAAATATACTCTTTTAATGAATTTCTTAAAAAAATAACCCAAATCTTCATAAGTTATTAGAAAATCTAATAACTAAA
TAGATATTAAATTTGGTGAT

Downstream 100 bases:

>100_bases
ATTCTTTCTTTTTACTTTTAGTTATTAGATTTTCTAATATATACTTTTATATATCTTAATTTCCTATTAATGTTTTGTGG
GAGTATGATAGCTATATGCA

Product: 2-hydroxyglutaryl-CoA dehydratase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MMKLKAIEKLMQKFASRKEQLYKQKEEGRKVFGMFCAYVPIEIILAANAIPVGLCGGKNDTIPIAEEDLPRNLCPLIKSS
YGFKKAKTCPYFEASDIVIGETTCEGKKKMFELMERLVPMHIMHLPHMKDEDSLKIWIKEVEKLKELVEKETGNKITEEK
LKETVDKVNKVRELFYKLYELRKNKPAPIKGLDVLKLFQFAYLLDIDDTIGILEDLIEELEERVKKGEGYEGKRILITGC
PMVAGNNKIVEIIEEVGGVVVGEESCTGTRFFENFVEGYSVEDIAKRYFKIPCACRFKNDERVENIKRLVKELDVDGVVY
YTLQYCHTFNIEGAKVEEALKEEGIPIIRIETDYSESDREQLKTRLEAFIEMI

Sequences:

>Translated_373_residues
MMKLKAIEKLMQKFASRKEQLYKQKEEGRKVFGMFCAYVPIEIILAANAIPVGLCGGKNDTIPIAEEDLPRNLCPLIKSS
YGFKKAKTCPYFEASDIVIGETTCEGKKKMFELMERLVPMHIMHLPHMKDEDSLKIWIKEVEKLKELVEKETGNKITEEK
LKETVDKVNKVRELFYKLYELRKNKPAPIKGLDVLKLFQFAYLLDIDDTIGILEDLIEELEERVKKGEGYEGKRILITGC
PMVAGNNKIVEIIEEVGGVVVGEESCTGTRFFENFVEGYSVEDIAKRYFKIPCACRFKNDERVENIKRLVKELDVDGVVY
YTLQYCHTFNIEGAKVEEALKEEGIPIIRIETDYSESDREQLKTRLEAFIEMI
>Mature_373_residues
MMKLKAIEKLMQKFASRKEQLYKQKEEGRKVFGMFCAYVPIEIILAANAIPVGLCGGKNDTIPIAEEDLPRNLCPLIKSS
YGFKKAKTCPYFEASDIVIGETTCEGKKKMFELMERLVPMHIMHLPHMKDEDSLKIWIKEVEKLKELVEKETGNKITEEK
LKETVDKVNKVRELFYKLYELRKNKPAPIKGLDVLKLFQFAYLLDIDDTIGILEDLIEELEERVKKGEGYEGKRILITGC
PMVAGNNKIVEIIEEVGGVVVGEESCTGTRFFENFVEGYSVEDIAKRYFKIPCACRFKNDERVENIKRLVKELDVDGVVY
YTLQYCHTFNIEGAKVEEALKEEGIPIIRIETDYSESDREQLKTRLEAFIEMI

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM

Homologues:

Organism=Escherichia coli, GI87082427, Length=355, Percent_Identity=42.2535211267606, Blast_Score=289, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y007_METJA (Q60318)

Other databases:

- EMBL:   L77117
- PIR:   G64300
- RefSeq:   NP_246970.1
- GeneID:   1450846
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0007
- NMPDR:   fig|243232.1.peg.7
- TIGR:   MJ0007
- HOGENOM:   HBG304933
- OMA:   PRNTCAL
- ProtClustDB:   CLSK876032
- BioCyc:   MJAN243232:MJ_0007-MONOMER
- InterPro:   IPR010327

Pfam domain/function: PF06050 HGD-D

EC number: NA

Molecular weight: Translated: 42985; Mature: 42985

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91fcc48)-;

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLKAIEKLMQKFASRKEQLYKQKEEGRKVFGMFCAYVPIEIILAANAIPVGLCGGKND
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TIPIAEEDLPRNLCPLIKSSYGFKKAKTCPYFEASDIVIGETTCEGKKKMFELMERLVPM
CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
HIMHLPHMKDEDSLKIWIKEVEKLKELVEKETGNKITEEKLKETVDKVNKVRELFYKLYE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRKNKPAPIKGLDVLKLFQFAYLLDIDDTIGILEDLIEELEERVKKGEGYEGKRILITGC
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PMVAGNNKIVEIIEEVGGVVVGEESCTGTRFFENFVEGYSVEDIAKRYFKIPCACRFKND
CEECCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCH
ERVENIKRLVKELDVDGVVYYTLQYCHTFNIEGAKVEEALKEEGIPIIRIETDYSESDRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHH
QLKTRLEAFIEMI
HHHHHHHHHHHCH
>Mature Secondary Structure
MMKLKAIEKLMQKFASRKEQLYKQKEEGRKVFGMFCAYVPIEIILAANAIPVGLCGGKND
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TIPIAEEDLPRNLCPLIKSSYGFKKAKTCPYFEASDIVIGETTCEGKKKMFELMERLVPM
CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
HIMHLPHMKDEDSLKIWIKEVEKLKELVEKETGNKITEEKLKETVDKVNKVRELFYKLYE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRKNKPAPIKGLDVLKLFQFAYLLDIDDTIGILEDLIEELEERVKKGEGYEGKRILITGC
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PMVAGNNKIVEIIEEVGGVVVGEESCTGTRFFENFVEGYSVEDIAKRYFKIPCACRFKND
CEECCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCH
ERVENIKRLVKELDVDGVVYYTLQYCHTFNIEGAKVEEALKEEGIPIIRIETDYSESDRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHH
QLKTRLEAFIEMI
HHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087