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The map label for this gene is dedA [C]

Identifier: 30995462

GI number: 30995462

Start: 1691957

End: 1692544

Strand: Reverse

Name: dedA [C]

Synonym: HI1629

Alternate gene names: 30995462

Gene position: 1692544-1691957 (Counterclockwise)

Preceding gene: 16273520

Following gene: 16273515

Centisome position: 92.48

GC content: 34.41

Gene sequence:

>588_bases
ATGGAATTTTTAATTGGATTTTTTACTGAATATGGTTATTGGGCTGTYCTTTTTGTTTTAATTATTTGTGGATTTGGTGT
ACCTATTCCAGAAGATATAACATTAGTTTCAGGTGGTGTCATTGCGGGGCTTTATCCAGAAAATGTCAATTCTCATTTGA
TGTTACTGGTTAGTATGATTGGTGTGCTTGCTGGCGATTCCTGTATGTATTGGCTTGGTCGAATTTATGGCACGAAAATT
TTACGTTTCCGACCAATACGTAGAATCGTAACATTACAGCGTTTAAGAATGGTGCGTGAAAAATTCAGTCAATATGGCAA
TCGAGTACTGTTTGTTGCACGATTTTTACCCGGTTTACGTGCTCCAATTTATATGGTATCAGGTATTACACGCCGTGTAA
GTTATGTTCGTTTTGTTTTAATAGATTTCTGTGCTGCGATTATTTCTGTACCTATTTGGATTTATCTTGGGGAATTGGGG
GCTAAAAATTTAGATTGGCTACATACACAAATTCAAAAAGGTCAAATTGTGATTTATATATTTATTGGGTACTTGTACTA
TTCTTTTTTGGAAATGGAAAAAATCTAA

Upstream 100 bases:

>100_bases
TTTCAAATCAAACTTTTTTCTAGGCTTTTTGATTTGAAAAGATTAAAATGTGAACCAATTTTTTATCACATCTATTAATA
TAATAAAAAAGCAGGAACAA

Downstream 100 bases:

>100_bases
AAAATCAACGCAATAATAGAATAATAAACGGCTAAAAATATTTCTATTTTTAGCCATACTTTTTAATTTTCTTCTTTATT
TTCTTTAAATAAGCCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEFLIGFFTEYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPENVNSHLMLLVSMIGVLAGDSCMYWLGRIYGTKI
LRFRPIRRIVTLQRLRMVREKFSQYGNRVLFVARFLPGLRAPIYMVSGITRRVSYVRFVLIDFCAAIISVPIWIYLGELG
AKNLDWLHTQIQKGQIVIYIFIGYLYYSFLEMEKI

Sequences:

>Translated_195_residues
MEFLIGFFTEYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPENVNSHLMLLVSMIGVLAGDSCMYWLGRIYGTKI
LRFRPIRRIVTLQRLRMVREKFSQYGNRVLFVARFLPGLRAPIYMVSGITRRVSYVRFVLIDFCAAIISVPIWIYLGELG
AKNLDWLHTQIQKGQIVIYIFIGYLYYSFLEMEKI
>Mature_195_residues
MEFLIGFFTEYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPENVNSHLMLLVSMIGVLAGDSCMYWLGRIYGTKI
LRFRPIRRIVTLQRLRMVREKFSQYGNRVLFVARFLPGLRAPIYMVSGITRRVSYVRFVLIDFCAAIISVPIWIYLGELG
AKNLDWLHTQIQKGQIVIYIFIGYLYYSFLEMEKI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family

Homologues:

Organism=Escherichia coli, GI1788656, Length=155, Percent_Identity=28.3870967741935, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1629_HAEIN (P45280)

Other databases:

- EMBL:   L42023
- PIR:   D64133
- RefSeq:   NP_439771.2
- GeneID:   950844
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1629
- NMPDR:   fig|71421.1.peg.1543
- TIGR:   HI_1629
- HOGENOM:   HBG308597
- OMA:   LIICGFG
- ProtClustDB:   CLSK870182
- BioCyc:   HINF71421:HI_1629-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 22486; Mature: 22486

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe7eb02c)-; HASH(0xddd6040)-; HASH(0xe2732ac)-; HASH(0xed16018)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLIGFFTEYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPENVNSHLMLLVSMI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHH
GVLAGDSCMYWLGRIYGTKILRFRPIRRIVTLQRLRMVREKFSQYGNRVLFVARFLPGLR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCC
APIYMVSGITRRVSYVRFVLIDFCAAIISVPIWIYLGELGAKNLDWLHTQIQKGQIVIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHH
FIGYLYYSFLEMEKI
HHHHHHHHHHHHHCH
>Mature Secondary Structure
MEFLIGFFTEYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPENVNSHLMLLVSMI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHH
GVLAGDSCMYWLGRIYGTKILRFRPIRRIVTLQRLRMVREKFSQYGNRVLFVARFLPGLR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCC
APIYMVSGITRRVSYVRFVLIDFCAAIISVPIWIYLGELGAKNLDWLHTQIQKGQIVIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHH
FIGYLYYSFLEMEKI
HHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800