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The map label for this gene is 16273512

Identifier: 16273512

GI number: 16273512

Start: 1688543

End: 1689226

Strand: Reverse

Name: 16273512

Synonym: HI1624

Alternate gene names: NA

Gene position: 1689226-1688543 (Counterclockwise)

Preceding gene: 16273514

Following gene: 16273511

Centisome position: 92.3

GC content: 37.13

Gene sequence:

>684_bases
ATGGAATTGAAAAAAATCGCTGTGGGATTAACCGCACTTTTAGGTATGTCTGTTGCTAACGCACACAATGTTTGGCTTGA
GCCTGCTTCATCGCAAGATGAATACGTGGTGAAATTTGGACATGAACAAACTGAAACCTATCCAGAATCTAAACTTAAAT
CTATCCAAGCCTTAAATTCGCAAGGCAAATTAACTGCCGTTGATTACCAATTCAGAAATGGCGAAGCCTATCTTATGCCT
AAATCAGATTTAGTATTCGTTCATTTCGATAATGGTGTATGGTCAAAATTACCAAGCGGTAAATACGTTGAAAAAACAAA
ACGTGAAGAACCAACAGCAGAATTTAGTACCAATCCTGTTAAATTTGGTAAAGCGATTTTGAAATGGGATGCTGAATCTT
TCAAATCTCATCAACAAGCTTACGAATTGATTCCTCAAGAAAAAGCACAAGCGAATAAACCACTTTCTATCCTTGTGTTA
CATAATGGTAAACCCGTTCAAGGCATTAAAGTGGGTGTGAGTGAAGATGCACCGTTCAATTTAACTAATGAAAAAGGTAT
CGCTCAATTTACGCCAACTAAAGGCTTCAACAAAGTATGGGCAGAGTTTGAGGAAAAAGTAACAAATAATGCGGATTACG
ATCGTCGAACTGTGGAATATATGCTAACTTTTGACGCACAATAA

Upstream 100 bases:

>100_bases
CCAATTTTCATCAATTTCCTTAAAAAATGACTTGATTCTAAAGTTACTTCATATTTTATCATACGCCTAGATTTTCTTAA
ACAAACAAGGAGTATCCAAA

Downstream 100 bases:

>100_bases
TATGGATTTGGGATGAAAAAATTTGCTTTTTTAACCGCACTTTTTGCGGCTTGCTATCTCCCGAATGCTTATGCCCACGC
ACTTTATGTGTTTGCCCAAT

Product: branched chain amino acid ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MELKKIAVGLTALLGMSVANAHNVWLEPASSQDEYVVKFGHEQTETYPESKLKSIQALNSQGKLTAVDYQFRNGEAYLMP
KSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPVKFGKAILKWDAESFKSHQQAYELIPQEKAQANKPLSILVL
HNGKPVQGIKVGVSEDAPFNLTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRTVEYMLTFDAQ

Sequences:

>Translated_227_residues
MELKKIAVGLTALLGMSVANAHNVWLEPASSQDEYVVKFGHEQTETYPESKLKSIQALNSQGKLTAVDYQFRNGEAYLMP
KSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPVKFGKAILKWDAESFKSHQQAYELIPQEKAQANKPLSILVL
HNGKPVQGIKVGVSEDAPFNLTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRTVEYMLTFDAQ
>Mature_227_residues
MELKKIAVGLTALLGMSVANAHNVWLEPASSQDEYVVKFGHEQTETYPESKLKSIQALNSQGKLTAVDYQFRNGEAYLMP
KSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPVKFGKAILKWDAESFKSHQQAYELIPQEKAQANKPLSILVL
HNGKPVQGIKVGVSEDAPFNLTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRTVEYMLTFDAQ

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1624_HAEIN (P44276)

Other databases:

- EMBL:   L42023
- PIR:   G64038
- RefSeq:   NP_439765.1
- GeneID:   950470
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1624
- TIGR:   HI_1624
- HOGENOM:   HBG297228
- OMA:   SGAWAYD
- ProtClustDB:   CLSK892419
- BioCyc:   HINF71421:HI_1624-MONOMER
- InterPro:   IPR019613

Pfam domain/function: PF10670 NikM

EC number: NA

Molecular weight: Translated: 25564; Mature: 25564

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKIAVGLTALLGMSVANAHNVWLEPASSQDEYVVKFGHEQTETYPESKLKSIQALNS
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHCC
QGKLTAVDYQFRNGEAYLMPKSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPV
CCCEEEEEEEEECCEEEEEECCCEEEEEECCCHHHCCCCCCHHHHHCCCCCCCCCCCCCH
KFGKAILKWDAESFKSHQQAYELIPQEKAQANKPLSILVLHNGKPVQGIKVGVSEDAPFN
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCC
LTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRTVEYMLTFDAQ
CCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MELKKIAVGLTALLGMSVANAHNVWLEPASSQDEYVVKFGHEQTETYPESKLKSIQALNS
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHCC
QGKLTAVDYQFRNGEAYLMPKSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPV
CCCEEEEEEEEECCEEEEEECCCEEEEEECCCHHHCCCCCCHHHHHCCCCCCCCCCCCCH
KFGKAILKWDAESFKSHQQAYELIPQEKAQANKPLSILVLHNGKPVQGIKVGVSEDAPFN
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCC
LTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRTVEYMLTFDAQ
CCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023