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The map label for this gene is lpp

Identifier: 16273474

GI number: 16273474

Start: 1647856

End: 1648323

Strand: Reverse

Name: lpp

Synonym: HI1579

Alternate gene names: 16273474

Gene position: 1648323-1647856 (Counterclockwise)

Preceding gene: 16273475

Following gene: 16273467

Centisome position: 90.07

GC content: 41.24

Gene sequence:

>468_bases
ATGAAAAAAACAAATATGGCATTAGCACTGTTAGTTGCTTTTAGTGTAACTGGTTGTGCAAATACTGATATTTTCAGCGG
TGATGTTTATAGCGCATCTCAAGCAAAGGAAGCGCGTTCAATTACTTATGGTACGATTGTTTCTGTACGCCCTGTTAAAA
TTCAAGCTGATAATCAAGGTGTAGTTGGTACGCTTGGTGGTGGAGCTTTAGGTGGTATTGCTGGTAGTACAATTGGCGGT
GGTCGTGGTCAAGCTATTGCAGCAGTAGTTGGTGCAATTGGCGGTGCAATAGCTGGAAGTAAAATCGAAGAAAAAATGAG
TCAAGTAAACGGTGCTGAACTTGTAATTAAGAAAGATGATGGTCAAGAGATCGTTGTTGTTCAAAAGGCTGACAGCAGTT
TTTGTAGCTTGGTCGCCGAGTTCGTATTTGTTGGTGGCGGCTCAAGCTTAAATGTTTCTGTGCTATAA

Upstream 100 bases:

>100_bases
GGTGCTTGTGTTTTAGTATCTGACAATGGTAATACTAAAAACATTTCAACTTTTTCTCCAAGAAACCCACTTTAATTCCT
TCTAATATAGAGAATATTAT

Downstream 100 bases:

>100_bases
CCAATAGCATTAAAGTCTAATATGATTAATCAGTGTCTTAACTTAGTAAGGCACTGATTTTTTTATAATTAAATTCATTT
AAAATATATATTATCGTCTA

Product: 15 kDa peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFCSLVAEFVFVGGGSSLNVSVL

Sequences:

>Translated_155_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFCSLVAEFVFVGGGSSLNVSVL
>Mature_155_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFCSLVAEFVFVGGGSSLNVSVL

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family

Homologues:

Organism=Escherichia coli, GI48994887, Length=144, Percent_Identity=45.8333333333333, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCP_HAEIN (P10325)

Other databases:

- EMBL:   M18877
- EMBL:   L42023
- PIR:   I64130
- RefSeq:   NP_439725.1
- GeneID:   950439
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1579
- NMPDR:   fig|71421.1.peg.1500
- TIGR:   HI_1579
- HOGENOM:   HBG531656
- OMA:   MRAYVQQ
- ProtClustDB:   CLSK870155
- BioCyc:   HINF71421:HI_1579-MONOMER
- InterPro:   IPR008816

Pfam domain/function: PF05433 Rick_17kDa_Anti

EC number: NA

Molecular weight: Translated: 15425; Mature: 15425

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQG
CCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHCEEEEEEEEEEEEEEEECCCC
VVGTLGGGALGGIAGSTIGGGRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDD
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECC
GQEIVVVQKADSSFCSLVAEFVFVGGGSSLNVSVL
CCEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEC
>Mature Secondary Structure
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQG
CCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHCEEEEEEEEEEEEEEEECCCC
VVGTLGGGALGGIAGSTIGGGRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDD
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECC
GQEIVVVQKADSSFCSLVAEFVFVGGGSSLNVSVL
CCEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800