| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273390
Identifier: 16273390
GI number: 16273390
Start: 1566833
End: 1567393
Strand: Direct
Name: 16273390
Synonym: HI1487
Alternate gene names: NA
Gene position: 1566833-1567393 (Clockwise)
Preceding gene: 16273389
Following gene: 16273391
Centisome position: 85.61
GC content: 32.98
Gene sequence:
>561_bases ATGAATGCAATCCAATTTAGATATTTTAAAGGCGTTATGACTAAAGAGCCTCTAAAAACGATTATCGACACTTGGTACAA ATTAAGAGCTGAACGAGATAAAAAGCTAACCAACATATTTAATACTATCCCTTTTTATGAAAGCTGGTTAGGTGATGAAA CTTCTATTTTTGGAATAGTTTGCAGTTATGACAATCCAGCTCGTGATGAGGCAGTATTAACAAAAGGATACAGAACTGAA GATTATAAAGGAAAATGTGTGGTTAAACCTGATAGACGTTATAAGGTTGGCAAGGATTTTGACAAAAAACTACAGGCTAT TCGACAAATTTTAAAGGAAGCCCCTGATTTCTCAAGTTATTCGCTAAAAGAGCTGGGTATGTATTTGTTAGTTGGTAATT TTAGCCGACTTTATTTCTCAGTATCTGGGGTTCAAGATGATATTTATATCGCAAAAATTCCAGTTAAAGAGCAAGGTAAT TTTGGTGATGATTTTTTAGAAATCCACGAATGCTTAACTGAAATAAAAGAGAGTGAATTTCTTTCTATTCAAGGCTTATA A
Upstream 100 bases:
>100_bases AATCTTTGTTTAAAGGGCAATACACCCACGCAGCTATTTTTGTGGGGAATGTGTCGGATCAGTTGCCAAATATGCGAATG ATGTTAGCGAGGGGGTAAAG
Downstream 100 bases:
>100_bases CAAGGAGGCAACTATGTAACCGCACAATAACCGCTGCCCACACCATTCCATCTAGGTTGTTATAACTCGGTGTGGGCAAG TTTAAAGGGTGTTTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNAIQFRYFKGVMTKEPLKTIIDTWYKLRAERDKKLTNIFNTIPFYESWLGDETSIFGIVCSYDNPARDEAVLTKGYRTE DYKGKCVVKPDRRYKVGKDFDKKLQAIRQILKEAPDFSSYSLKELGMYLLVGNFSRLYFSVSGVQDDIYIAKIPVKEQGN FGDDFLEIHECLTEIKESEFLSIQGL
Sequences:
>Translated_186_residues MNAIQFRYFKGVMTKEPLKTIIDTWYKLRAERDKKLTNIFNTIPFYESWLGDETSIFGIVCSYDNPARDEAVLTKGYRTE DYKGKCVVKPDRRYKVGKDFDKKLQAIRQILKEAPDFSSYSLKELGMYLLVGNFSRLYFSVSGVQDDIYIAKIPVKEQGN FGDDFLEIHECLTEIKESEFLSIQGL >Mature_186_residues MNAIQFRYFKGVMTKEPLKTIIDTWYKLRAERDKKLTNIFNTIPFYESWLGDETSIFGIVCSYDNPARDEAVLTKGYRTE DYKGKCVVKPDRRYKVGKDFDKKLQAIRQILKEAPDFSSYSLKELGMYLLVGNFSRLYFSVSGVQDDIYIAKIPVKEQGN FGDDFLEIHECLTEIKESEFLSIQGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1487_HAEIN (P44214)
Other databases:
- EMBL: L42023 - PIR: H64031 - RefSeq: NP_439637.1 - GeneID: 950580 - GenomeReviews: L42023_GR - KEGG: hin:HI1487 - NMPDR: fig|71421.1.peg.1417 - TIGR: HI_1487 - ProtClustDB: CLSK2518373 - BioCyc: HINF71421:HI_1487-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21637; Mature: 21637
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIQFRYFKGVMTKEPLKTIIDTWYKLRAERDKKLTNIFNTIPFYESWLGDETSIFGIV CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEE CSYDNPARDEAVLTKGYRTEDYKGKCVVKPDRRYKVGKDFDKKLQAIRQILKEAPDFSSY ECCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC SLKELGMYLLVGNFSRLYFSVSGVQDDIYIAKIPVKEQGNFGDDFLEIHECLTEIKESEF CHHHHCHHHEECCHHEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC LSIQGL EEECCC >Mature Secondary Structure MNAIQFRYFKGVMTKEPLKTIIDTWYKLRAERDKKLTNIFNTIPFYESWLGDETSIFGIV CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEE CSYDNPARDEAVLTKGYRTEDYKGKCVVKPDRRYKVGKDFDKKLQAIRQILKEAPDFSSY ECCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC SLKELGMYLLVGNFSRLYFSVSGVQDDIYIAKIPVKEQGNFGDDFLEIHECLTEIKESEF CHHHHCHHHEECCHHEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC LSIQGL EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800