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The map label for this gene is yqfB [C]

Identifier: 16273304

GI number: 16273304

Start: 1492630

End: 1493001

Strand: Reverse

Name: yqfB [C]

Synonym: HI1394

Alternate gene names: 16273304

Gene position: 1493001-1492630 (Counterclockwise)

Preceding gene: 30995446

Following gene: 16273303

Centisome position: 81.58

GC content: 37.9

Gene sequence:

>372_bases
ATGCAACCAAATGACATCACTTTTTACCAACGTTTTGAAGCCGATATTCTCGCTGGGCATAAAACGATTAGCATTCGGGA
TGACTCCGAAAGCCATTTTAAAGCAGGCGATATTTTACGTGTGGGGCGGTTTGAAGATAATCAATATTTCTGCAACATTG
AAGTGTTAAGTGTGTCGCCGATTACCCTTGATGAACTGACACAACCACATGCGAAGCAGGAGAATATGGGGTTGGATGAG
TTGAAAGAAGTGATTCGGGGGATTTATCCGAATGAGATTATCTTTTGGGTAATTCAATTTAGCTTAAAGGAGTATTTTAA
TGAAGAAAAGTGCGTTAGAGAAATTATTATCACTGATAGAAAATTTAACTAA

Upstream 100 bases:

>100_bases
GTGAATTTTTACCAAGCTGGTGTAAAAAAGTATTAAATCAATTGATAAATCTAGGATTTGTAAAAACTTTCTAAAACCTA
ACCGCTCTTTAAGGATCAAA

Downstream 100 bases:

>100_bases
TCAAGAATTTAAACAGGCAACTAATAGTTTAATCTCATTTATTTATAAATTGAATAGAAATGAGGTTATTGAATTGGTTA
GATCTATTGGAATACTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQPNDITFYQRFEADILAGHKTISIRDDSESHFKAGDILRVGRFEDNQYFCNIEVLSVSPITLDELTQPHAKQENMGLDE
LKEVIRGIYPNEIIFWVIQFSLKEYFNEEKCVREIIITDRKFN

Sequences:

>Translated_123_residues
MQPNDITFYQRFEADILAGHKTISIRDDSESHFKAGDILRVGRFEDNQYFCNIEVLSVSPITLDELTQPHAKQENMGLDE
LKEVIRGIYPNEIIFWVIQFSLKEYFNEEKCVREIIITDRKFN
>Mature_123_residues
MQPNDITFYQRFEADILAGHKTISIRDDSESHFKAGDILRVGRFEDNQYFCNIEVLSVSPITLDELTQPHAKQENMGLDE
LKEVIRGIYPNEIIFWVIQFSLKEYFNEEKCVREIIITDRKFN

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family

Homologues:

Organism=Escherichia coli, GI1789267, Length=100, Percent_Identity=69, Blast_Score=151, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1394_HAEIN (P44172)

Other databases:

- EMBL:   L15391
- EMBL:   L42023
- PIR:   B64027
- RefSeq:   NP_439548.1
- ProteinModelPortal:   P44172
- SMR:   P44172
- GeneID:   950304
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1394
- NMPDR:   fig|71421.1.peg.1331
- TIGR:   HI_1394
- HOGENOM:   HBG296598
- OMA:   RDEAESH
- ProtClustDB:   PRK04980
- BioCyc:   HINF71421:HI_1394-MONOMER
- HAMAP:   MF_00684
- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314
- PIRSF:   PIRSF029143

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 14518; Mature: 14518

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPNDITFYQRFEADILAGHKTISIRDDSESHFKAGDILRVGRFEDNQYFCNIEVLSVSP
CCCCCCHHEEHHCHHEECCCEEEEEECCCCCCCCCCCEEEECEECCCEEEEEEEEEEECC
ITLDELTQPHAKQENMGLDELKEVIRGIYPNEIIFWVIQFSLKEYFNEEKCVREIIITDR
CCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
KFN
CCC
>Mature Secondary Structure
MQPNDITFYQRFEADILAGHKTISIRDDSESHFKAGDILRVGRFEDNQYFCNIEVLSVSP
CCCCCCHHEEHHCHHEECCCEEEEEECCCCCCCCCCCEEEECEECCCEEEEEEEEEEECC
ITLDELTQPHAKQENMGLDELKEVIRGIYPNEIIFWVIQFSLKEYFNEEKCVREIIITDR
CCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
KFN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7959067; 7542800; 10675023