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The map label for this gene is nlpC [C]

Identifier: 16273226

GI number: 16273226

Start: 1392055

End: 1392540

Strand: Direct

Name: nlpC [C]

Synonym: HI1314

Alternate gene names: 16273226

Gene position: 1392055-1392540 (Clockwise)

Preceding gene: 16273225

Following gene: 30995442

Centisome position: 76.06

GC content: 39.71

Gene sequence:

>486_bases
ATGAAAGTATATAAATCATTTTTAATCGCTACTGCATCGCTGTTTTTATTCGCTTGTTCCAGTTTTCAAAACGATGATTA
TGCGATGAACTATAAAGGTCAAATCGGCGAACCTATTATGGCCATAGCCATGTTGAGCGAACAACAACATGAATGGGCAG
GTACACCTTATGTGCTCGGCGGCGTTTCTCGTCGTGGGGTAGATTGTTCTGGTTTTGTGCAGAAAACTTTCTTCGATCGT
TTTAATCTTCGTTTGCCTAGAAGCACTGTTGAACAAGCTAATTATGGTAAACATGTACGCAAAGAAGATATTCAAACTGG
CGATTTAATTTTCTTTAAAACTGGCAGAGGCCCTAATGGTTATCATGTGGGGATTTATGTAAAAGAAGATAAATTCCTTC
ATGCTTCCACCAGAGGGGGAGTCGTCTATTCTTCAATGAATAACCCTTATTGGTCGAAAGCCTTCTGGCAAGTCAGACGG
ATTTAA

Upstream 100 bases:

>100_bases
TTTAAACCTGGGCAAAAGTTACGTGCCCGTGTAGAAAAAACTAAATAGTAAGCAACAAAAAGTGCGGTGAATTTCTACCG
CACTTTTCATATGAAAAGGT

Downstream 100 bases:

>100_bases
AAAGTATAATGCTGGAATTTTCCAGCATTTTTTTATTGTTTTTTCAACTGCTAGAAAATAAAAACCATTAAATTTATCTT
CAATTATTATTTCTGTGATC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGEPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I

Sequences:

>Translated_161_residues
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGEPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I
>Mature_161_residues
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGEPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family

Homologues:

Organism=Escherichia coli, GI1788001, Length=128, Percent_Identity=54.6875, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1788501, Length=115, Percent_Identity=50.4347826086956, Blast_Score=132, Evalue=8e-33,
Organism=Escherichia coli, GI1787944, Length=117, Percent_Identity=36.7521367521368, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786421, Length=126, Percent_Identity=31.7460317460317, Blast_Score=63, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1314_HAEIN (Q57223)

Other databases:

- EMBL:   L42023
- PIR:   H64170
- RefSeq:   NP_439465.1
- ProteinModelPortal:   Q57223
- SMR:   Q57223
- MEROPS:   C40.004
- GeneID:   949594
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1314
- NMPDR:   fig|71421.1.peg.1252
- TIGR:   HI_1314
- HOGENOM:   HBG362075
- OMA:   FLHASTR
- ProtClustDB:   CLSK870175
- BioCyc:   HINF71421:HI_1314-MONOMER
- InterPro:   IPR000064

Pfam domain/function: PF00877 NLPC_P60

EC number: NA

Molecular weight: Translated: 18388; Mature: 18388

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGEPIMAIAMLSEQQHEWAGTPYVLG
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GVSRRGVDCSGFVQKTFFDRFNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNG
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC
YHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRRI
EEEEEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHEECC
>Mature Secondary Structure
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGEPIMAIAMLSEQQHEWAGTPYVLG
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GVSRRGVDCSGFVQKTFFDRFNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNG
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC
YHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRRI
EEEEEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800