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The map label for this gene is ompA

Identifier: 16273088

GI number: 16273088

Start: 1235301

End: 1236362

Strand: Direct

Name: ompA

Synonym: HI1164

Alternate gene names: 16273088

Gene position: 1235301-1236362 (Clockwise)

Preceding gene: 30995427

Following gene: 30995428

Centisome position: 67.5

GC content: 40.87

Gene sequence:

>1062_bases
ATGAAAAAAACTGCAATCGCATTAGTAGTTGCTGGTTTAGCAGCAGCTTCAGTAGCTCAAGCAGCTCCACAAGAAAACAC
TTTCTACGCTGGCGTTAAAGCTGGTCAAGCATCTTTTCACGATGGACTTCGTGCTCTAGCTCGTGAATATAAAGTAGGTT
ATCACCGTAATTCTTTCACTTATGGTGTATTCGGTGGTTATCAAATTTTAAATCAAAATAACTTAGGTTTAGCGGTTGAA
TTAGGTTACGACGATTTCGGTCGTGCCAAAGGTCGTGAAAAAGGTAAAACTGTTGTTAAACACACTAACCACGGTACTCA
CTTAAGCTTAAAAGGTAGCTACGAAGTATTAGAAGGTTTAGATGTTTATGGTAAAGCAGGTGTTGCTTTAGTTCGTTCTG
ACTATAAATTATACAATGAAAATAGTAGTACTCTTAAAAAACTAGGCGAACATCACAGAGCACGTGCCTCTGGTTTATTT
GCAGTAGGTGCAGAATACGCAGTATTACCAGAATTAGCAGTTCGTTTAGAATACCAATGGCTAACTCGCGTAGGTAAATA
CCGCCCTCAAGATAAACCAAATACCGCACTTAACTACAACCCTTGGATTGGTTCTATCAATGCGGGTATTTCTTACCGTT
TTGGTCAAGGCGCAGCACCAGTTGTTGCAGCACCTGAAGTTGTAAGCAAAACTTTCAGCTTAAACTCTGATGTAACTTTC
GCATTTGGTAAAGCAAACTTAAAACCTCAAGCACAAGCAACATTAGACAGCATCTATGGCGAAATGTCACAAGTTAAAAG
TGCAAAAGTAGCTGTTGCTGGTTACACTGACCGTATTGGTTCTGACGCGTTCAACGTAAAACTTTCTCAAGAACGTGCAG
ATTCAGTAGCTAACTACTTTGTTGCTAAAGGTGTTGCAGCAGACGCAATCTCTGCAACTGGCTACGGTAAAGCAAACCCA
GTAACTGGTGCAACTTGTGACCAAGTTAAGGGTCGTAAAGCGCTTATCGCTTGTTTTGCTCCAGACCGTCGTGTAGAAAT
CGCGGTAAACGGTACTAAATAA

Upstream 100 bases:

>100_bases
CCTAGTTAAGTGACTGTTTATAATGTAGCTTTAATTAAAAGTTCAGTATAAACAAGGACACTTTTTATTACTATTCGATC
ACTAAATAGAGGACATCAAA

Downstream 100 bases:

>100_bases
TTTTAGTATTTGTTTAACGAAAGATTAAATACAGCAAAAGGCTTAAACTTCGGTTTAGGCCTTTTGTTTTAAATGAATAT
AAAACCAAGCATTTCAATCA

Product: outer membrane protein P5

Products: NA

Alternate protein names: OMP P5

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKTAIALVVAGLAAASVAQAAPQENTFYAGVKAGQASFHDGLRALAREYKVGYHRNSFTYGVFGGYQILNQNNLGLAVE
LGYDDFGRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVALVRSDYKLYNENSSTLKKLGEHHRARASGLF
AVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKPNTALNYNPWIGSINAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTF
AFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANP
VTGATCDQVKGRKALIACFAPDRRVEIAVNGTK

Sequences:

>Translated_353_residues
MKKTAIALVVAGLAAASVAQAAPQENTFYAGVKAGQASFHDGLRALAREYKVGYHRNSFTYGVFGGYQILNQNNLGLAVE
LGYDDFGRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVALVRSDYKLYNENSSTLKKLGEHHRARASGLF
AVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKPNTALNYNPWIGSINAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTF
AFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANP
VTGATCDQVKGRKALIACFAPDRRVEIAVNGTK
>Mature_353_residues
MKKTAIALVVAGLAAASVAQAAPQENTFYAGVKAGQASFHDGLRALAREYKVGYHRNSFTYGVFGGYQILNQNNLGLAVE
LGYDDFGRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVALVRSDYKLYNENSSTLKKLGEHHRARASGLF
AVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKPNTALNYNPWIGSINAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTF
AFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANP
VTGATCDQVKGRKALIACFAPDRRVEIAVNGTK

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1787191, Length=371, Percent_Identity=44.2048517520216, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI48994946, Length=119, Percent_Identity=36.1344537815126, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): OMP51_HAEIN (P43840)

Other databases:

- EMBL:   L42023
- PIR:   C64187
- RefSeq:   NP_439322.1
- ProteinModelPortal:   P43840
- GeneID:   950124
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1164
- NMPDR:   fig|71421.1.peg.1117
- TIGR:   HI_1164
- HOGENOM:   HBG741096
- OMA:   DDNEAQK
- ProtClustDB:   CLSK808491
- BioCyc:   HINF71421:HI_1164-MONOMER
- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665
- Gene3D:   G3DSA:2.40.160.20
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021
- PRINTS:   PR01022

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 37744; Mature: 37744

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAIALVVAGLAAASVAQAAPQENTFYAGVKAGQASFHDGLRALAREYKVGYHRNSFT
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEE
YGVFGGYQILNQNNLGLAVELGYDDFGRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGL
EEECCCEEEEECCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHHCC
DVYGKAGVALVRSDYKLYNENSSTLKKLGEHHRARASGLFAVGAEYAVLPELAVRLEYQW
CCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHH
LTRVGKYRPQDKPNTALNYNPWIGSINAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTF
HHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEECHHHHHHHHCCCCCEEE
AFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADSVANYF
EECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECHHCCCCCEEEEEECHHHHHHHHHHH
VAKGVAADAISATGYGKANPVTGATCDQVKGRKALIACFAPDRRVEIAVNGTK
HHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEEEECCC
>Mature Secondary Structure
MKKTAIALVVAGLAAASVAQAAPQENTFYAGVKAGQASFHDGLRALAREYKVGYHRNSFT
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEE
YGVFGGYQILNQNNLGLAVELGYDDFGRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGL
EEECCCEEEEECCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHHCC
DVYGKAGVALVRSDYKLYNENSSTLKKLGEHHRARASGLFAVGAEYAVLPELAVRLEYQW
CCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHH
LTRVGKYRPQDKPNTALNYNPWIGSINAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTF
HHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEECHHHHHHHHCCCCCEEE
AFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGYTDRIGSDAFNVKLSQERADSVANYF
EECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECHHCCCCCEEEEEECHHHHHHHHHHH
VAKGVAADAISATGYGKANPVTGATCDQVKGRKALIACFAPDRRVEIAVNGTK
HHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800