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The map label for this gene is cydA [C]

Identifier: 16273005

GI number: 16273005

Start: 1140354

End: 1141919

Strand: Reverse

Name: cydA [C]

Synonym: HI1076

Alternate gene names: 16273005

Gene position: 1141919-1140354 (Counterclockwise)

Preceding gene: 30995423

Following gene: 16273004

Centisome position: 62.4

GC content: 36.78

Gene sequence:

>1566_bases
ATGTTAGACGTTGTTGATCTTTCTCGCTTGCAGTTTGCTTTAACTGCGTTGTATCACTTCATTTTCGTGCCGCTAACATT
GGGTTTATCCTTTATTCTTGTAATTATGGAAACTATTTATGTGGCGACAGGTAAAGAAGTTTATAAAGATATGACAAAAT
TTTGGGGAAAGTTATTTGGTATTAACTTTGCCCTTGGGGTGACCACCGGTATTATTATGGAATTCCAATTTGGTACTAAC
TGGTCTTATTATTCTCATTACGTGGGGGATATTTTTGGTGCGCCACTTGCTATTGAAGCGTTACTTGCCTTCTTCTTAGA
ATCCACTTTTGTGGGGTTATTTTTCTTCGGTTGGGATCGTTTATCAAAAGGAAAACACTTATTAGCAACTTATTGTGTGG
CTTTCGGTTCTAATTTATCTGCTATGTGGATTTTGGTTGCAAATGGCTGGATGCAAGCACCAACAGGTTCAGAATTTAAT
TTTGAAACTGTACGTATGGAAATGACTAACTTCTTAGATCTTTGGTTAAACCCTGTTGCACAAAGTAAATTCTTACATAC
TCTTTCTGCAGGTTATGTGACAGGCGCATTTTTTGTTTTAGCCATTAGCTCATACTTTTTACTAAAAGGTCGTGATTTTG
AATTTGCAAAACGTTCTTTCTCCGTAGCTGCTACTTTTGGATTTATCGCCTCTATTTCAGTGCTAATTCTTGGTGATGAA
TCTGGTTATGATATTGGTAAAGCACAACCAGTAAAATTAGCCGCAATGGAAGCTGAATTTGAAACTCACCCAGCACCTGC
TCCATTCCTTCCAGTAGCAATTCCAAATACGGCTGAAATGAAAAATGATTTTGCGATTGAAATTCCTTATCTTGGCGGTG
TAATAGCAACTCGTTCAATTGATAAAGAAATTATAGGTCTAAAAGATCTTCAAGCATTAAATGAAACTCGTGTACGTAGT
GGTATCCGTGCTTATGAATTATTTACTCAACTACGCGCTGAGAAAAAAGCAAATGGTCAAGTAAATGAAGAAACCAAAGC
ACAATTCAATGAAGTTAAAAAAGATCTTGGTTTCGGTTTATTATTAAAACGCTATACAAACAATGTTGTTGATGCGACAG
AAGAACAAATTAAACAAGCCGCTCGTGATACTATTCCAAATGTAGGCCCTAATTTTTGGGCATTTCGTGCAATGATTGCA
GCTGGTGGTTTAATTGCTTTACTTACATTCGGCGCATTTGTTCAAAATTTACGTAATAAAGTCACTCAAATTCCATTATT
GTTAAAAGTTCTTTTATGGGGCTTGCCATTACCTTGGATTGCCATTGAGTGTGGTTGGTTCTTAGCAGAATATGGTCGTC
AGCCTTGGGCTACTTACGAGATCTTACCTGTTGGCGTATCCGCTTCTAATTTAAGTACAGGCGATTTATGGTTCTCTATT
GGTTTAATTTGTGCGCTTTATCTTGCGTTCATTATTGTTGAGATGTATTTGATGTTTAAATATGCGCGTTTGGGTCCAAG
TGCGTTAAAAACCGGCAAATACTACTTTGAACAATCAGCTAAATAA

Upstream 100 bases:

>100_bases
TTAAACTTAGCTGATTGGAGTTGAGTAATTAGGGATTATTTAAGGCATCGCCTTGTTAATCATTGTTGGAACTAATGTTG
TTTATACAAAGGAGTTGAGA

Downstream 100 bases:

>100_bases
GTAGGAGATAAATTATGATTGATTATGAATTTCTACGTTTTATTTGGTGGGTGTTAGTTATTGTATTATTGATTGGCTTC
TCTGTAACTGATGGATTTGA

Product: cytochrome D ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome oxidase subunit I

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFGINFALGVTTGIIMEFQFGTN
WSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFN
FETVRMEMTNFLDLWLNPVAQSKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDE
SGYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSIDKEIIGLKDLQALNETRVRS
GIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGLLLKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIA
AGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSI
GLICALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQSAK

Sequences:

>Translated_521_residues
MLDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFGINFALGVTTGIIMEFQFGTN
WSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFN
FETVRMEMTNFLDLWLNPVAQSKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDE
SGYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSIDKEIIGLKDLQALNETRVRS
GIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGLLLKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIA
AGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSI
GLICALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQSAK
>Mature_521_residues
MLDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFGINFALGVTTGIIMEFQFGTN
WSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFN
FETVRMEMTNFLDLWLNPVAQSKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDE
SGYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSIDKEIIGLKDLQALNETRVRS
GIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGLLLKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIA
AGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSI
GLICALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQSAK

Specific function: Probable cytochrome oxidase subunit

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family

Homologues:

Organism=Escherichia coli, GI87081779, Length=520, Percent_Identity=64.0384615384615, Blast_Score=713, Evalue=0.0,
Organism=Escherichia coli, GI1787212, Length=511, Percent_Identity=58.3170254403131, Blast_Score=603, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYOA_HAEIN (P45021)

Other databases:

- EMBL:   L42023
- PIR:   E64181
- RefSeq:   NP_439232.1
- GeneID:   950049
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1076
- NMPDR:   fig|71421.1.peg.1033
- TIGR:   HI_1076
- HOGENOM:   HBG753185
- OMA:   DLWFSII
- ProtClustDB:   CLSK2518368
- BioCyc:   HINF71421:HI_1076-MONOMER
- GO:   GO:0006810
- InterPro:   IPR002585

Pfam domain/function: PF01654 Bac_Ubq_Cox

EC number: 1.10.3.-

Molecular weight: Translated: 58137; Mature: 58137

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdb0cb94)-; HASH(0xde77aa4)-; HASH(0xb953458)-; HASH(0xe2d146c)-; HASH(0xcda6d48)-; HASH(0xd773250)-; HASH(0xd79b8e0)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
INFALGVTTGIIMEFQFGTNWSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDR
CHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFNFETVRMEMTNFLDLWLNPVA
HCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHCHHH
QSKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECC
SGYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSI
CCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHCCCCCEEEECCCCCCHHHHHH
DKEIIGLKDLQALNETRVRSGIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LLKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIAAGGLIALLTFGAFVQNLRNK
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHH
GLICALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQSAK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCH
>Mature Secondary Structure
MLDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
INFALGVTTGIIMEFQFGTNWSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDR
CHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFNFETVRMEMTNFLDLWLNPVA
HCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHCHHH
QSKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECC
SGYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSI
CCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHCCCCCEEEECCCCCCHHHHHH
DKEIIGLKDLQALNETRVRSGIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LLKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIAAGGLIALLTFGAFVQNLRNK
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHH
GLICALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQSAK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800