| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272986
Identifier: 16272986
GI number: 16272986
Start: 1119024
End: 1120406
Strand: Reverse
Name: 16272986
Synonym: HI1054
Alternate gene names: NA
Gene position: 1120406-1119024 (Counterclockwise)
Preceding gene: 30995419
Following gene: 16272984
Centisome position: 61.22
GC content: 36.08
Gene sequence:
>1383_bases ATGAAGGGCAAAACGGCGGCGGTTCAAATAAAAAATCGGGCAAAAGCTGCCGCCACCGTATCAGAAAAGCAGTTAATTGG TCGTGGCGTGCGTTATTTTCCATTTGCGTTTGAAGATAAACAGCCGAATAAACGCAAATTTGACAACGATATGCAACACG AATTGCGTATTTTGGAAGAATTGTTTTATTACACGCACGATGAGCAATCTCGCTATATTTCAGAATTAAAAGCAGAACTT CGCAAAGATGGCTTTATTCCCGAAAACGATAAAGATAAAGTTTTAACCACATTCAAACTAAAATCTGAATTTGCAGATAA TGAAAATTTTAAAAACTTATTGATTTGGGCGAATAAAAAAATCCCTAATCCCAATGCCAAAGCCAATAATGCAGACAGCC TAAAAGCCAATCCGCCACCGCAACCGCTTCCATTCCCAGTTCACGGCAAATTGTTGCAAGAAACGCAATTTACAGCCGAT GAAAATGATGAAAAAGCCCGACAAATCGGCACACAAAATAATTTTACTGAAACCATAGAAATGAGTGAAATAGAGCGGCA CATTTTTAATAAAGCCTTGCATATCAAAGGAAAAAATAGTCAATCTTTATTCCATTTTGACCGCTTACAAAGCAAACTCA ACATTCAAAATCGCAATGAATTGCAAAATAACTTGTTAAAAGATTGGCAAATTGAATTTTTGGGATTGGGGCAAGATAAA CAGATTAGCCCAGATGACAAACTTGCAGGCTGCCTGAAAATCTTGGAAATGGTTGAAAAACATCTCAATGAAAGTGATAT ACCGTTTATCGGTACAAAAGAATTTACGCCTAAAAAATTATGGGAAATTTTTGGCACACCAAAACAAAAATGGGTCAAAA AAGATGATGTAAAAACTGCCATTGCCACGCAAAATGATTGGTATGTGATGGATAATTTTGCTGGAACGAGTTTGGAAGAA GCGTTAATTCAATTTATTTCAGAGCGTTTGGGCGATTTGAAGTCTAAATATGATGTTCATTTAATCCGTAATGAAGAAGT GTTTAAATTGAATAACTTTGCTGATGGTGAAGGATTTATGCCGGACTTTATTTTATTGCTGAAAGACAAACAAAAATCTT CTTCCAATGGTGTAAACGACTTTTTGCATTACCAAATTTTCATTGAACCCAAAGGTGAGCATTTAGTGGAGACGGATATG TGGAAAAAAGAATTTTTAGAAGCCATCACAGCAGAATATGGCAAGGATAAGATTCTGCAAAAAGATACACCGCATTATCG TTTGATCGGTTTGCCGTTTTTTACTGACAATGAGAAAAATCCAAAAGAATATGAACAATTTACGAAGTCATTCCCTTTAG GGGAGGCATCGCTTGAAAAATAG
Upstream 100 bases:
>100_bases AATTTGGAAGCGGCTGATAATCCGATCCGTGCTATTTTTACGGTGGACAGATTAACTGAAGGTTGGGACGTTCTGAATTT GTTTGATATTGTGCGTTTGT
Downstream 100 bases:
>100_bases AGTGGTGTATTATTAAAACACAACCTTAACAAAACAAGGGAGCATTAAAAAAATGCTCCCTTTCTCTTAATCAACTTAAC TTTATGGAATGATGAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKGKTAAVQIKNRAKAAATVSEKQLIGRGVRYFPFAFEDKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKAEL RKDGFIPENDKDKVLTTFKLKSEFADNENFKNLLIWANKKIPNPNAKANNADSLKANPPPQPLPFPVHGKLLQETQFTAD ENDEKARQIGTQNNFTETIEMSEIERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNNLLKDWQIEFLGLGQDK QISPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTAIATQNDWYVMDNFAGTSLEE ALIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDM WKKEFLEAITAEYGKDKILQKDTPHYRLIGLPFFTDNEKNPKEYEQFTKSFPLGEASLEK
Sequences:
>Translated_460_residues MKGKTAAVQIKNRAKAAATVSEKQLIGRGVRYFPFAFEDKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKAEL RKDGFIPENDKDKVLTTFKLKSEFADNENFKNLLIWANKKIPNPNAKANNADSLKANPPPQPLPFPVHGKLLQETQFTAD ENDEKARQIGTQNNFTETIEMSEIERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNNLLKDWQIEFLGLGQDK QISPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTAIATQNDWYVMDNFAGTSLEE ALIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDM WKKEFLEAITAEYGKDKILQKDTPHYRLIGLPFFTDNEKNPKEYEQFTKSFPLGEASLEK >Mature_460_residues MKGKTAAVQIKNRAKAAATVSEKQLIGRGVRYFPFAFEDKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKAEL RKDGFIPENDKDKVLTTFKLKSEFADNENFKNLLIWANKKIPNPNAKANNADSLKANPPPQPLPFPVHGKLLQETQFTAD ENDEKARQIGTQNNFTETIEMSEIERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNNLLKDWQIEFLGLGQDK QISPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTAIATQNDWYVMDNFAGTSLEE ALIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDM WKKEFLEAITAEYGKDKILQKDTPHYRLIGLPFFTDNEKNPKEYEQFTKSFPLGEASLEK
Specific function: Unknown
COG id: COG3421
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1054_HAEIN (P44104)
Other databases:
- EMBL: L42023 - PIR: E64019 - RefSeq: NP_439213.1 - REBASE: 2820 - GeneID: 950034 - GenomeReviews: L42023_GR - KEGG: hin:HI1054 - NMPDR: fig|71421.1.peg.1014 - TIGR: HI_1054 - BioCyc: HINF71421:HI_1054-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53472; Mature: 53472
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKTAAVQIKNRAKAAATVSEKQLIGRGVRYFPFAFEDKQPNKRKFDNDMQHELRILEE CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCHHHCCCHHHHHHHHHHH LFYYTHDEQSRYISELKAELRKDGFIPENDKDKVLTTFKLKSEFADNENFKNLLIWANKK HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCC IPNPNAKANNADSLKANPPPQPLPFPVHGKLLQETQFTADENDEKARQIGTQNNFTETIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHH MSEIERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNNLLKDWQIEFLGLGQDK HHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCC QISPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCHHHHHCHHHHHHH IATQNDWYVMDNFAGTSLEEALIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFM EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCC PDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDMWKKEFLEAITAEYGKDKILQ CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KDTPHYRLIGLPFFTDNEKNPKEYEQFTKSFPLGEASLEK CCCCCEEEEEECEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKGKTAAVQIKNRAKAAATVSEKQLIGRGVRYFPFAFEDKQPNKRKFDNDMQHELRILEE CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCHHHCCCHHHHHHHHHHH LFYYTHDEQSRYISELKAELRKDGFIPENDKDKVLTTFKLKSEFADNENFKNLLIWANKK HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCC IPNPNAKANNADSLKANPPPQPLPFPVHGKLLQETQFTADENDEKARQIGTQNNFTETIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHH MSEIERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNNLLKDWQIEFLGLGQDK HHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCC QISPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCHHHHHCHHHHHHH IATQNDWYVMDNFAGTSLEEALIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFM EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCC PDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDMWKKEFLEAITAEYGKDKILQ CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KDTPHYRLIGLPFFTDNEKNPKEYEQFTKSFPLGEASLEK CCCCCEEEEEECEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800