| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272914
Identifier: 16272914
GI number: 16272914
Start: 1034952
End: 1035464
Strand: Direct
Name: 16272914
Synonym: HI0976.1
Alternate gene names: NA
Gene position: 1034952-1035464 (Clockwise)
Preceding gene: 16272913
Following gene: 16272915
Centisome position: 56.55
GC content: 39.38
Gene sequence:
>513_bases ATGGCATTTATTGGCGTGGCAATTTTAATTAATGGCGGAAAAAATAATGAAGGCATTGATAACATCAGTTTATTCGGCTG TTTATTAGTACTAAGTGCTGGGATCATTTTCGCTGCCGTATTACGTTGGACACAGCGAGTTGTTGCCAAAGTTTCAACGC AAGCCTATACCTCCGTCAGCATTGTACTTGGCACCATCACAACATTGCCATTTACGCTATTACTCACAGAAAACTGGCAA ATATCATTAAATTCTACGGGTATTGCAGGTTTATTATATCTTGCCATTGGCTGTAGCTGGCTTGCCTATTGGTTATGGAA TAAAGGCCTTAATAGTGTAGATGCCAATATCTCCGGTGTTTTAGTCGCACTTGAACCGCTATTCGGCATTTTATTTGCTG TATCATTACTTGGCGAAACGCTATCATTTTCAGCCGCACTTGGTATAACAATTATTATGTTAGCCACACTTGGCTCGACT TTACTGCCGAAACTTTTAAAAAAATCGGTATAA
Upstream 100 bases:
>100_bases GTGCAGTCACCATGATTGGGCTAGAACCGCTGCTCGTTGTATTTGTCGGGCATTTCTTCTTTAAGACAAAGCAAAATGGT TTCACTGGCTATTCGGTGCA
Downstream 100 bases:
>100_bases TATGCCCCCAAAATTTTGGATTATCATCATTGTGAAAAAAATTGATCAACAAAGTTTAGAAAATGCCTACCGTTTATTTG AAAGCGGTGATATTCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVSTQAYTSVSIVLGTITTLPFTLLLTENWQ ISLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSVDANISGVLVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGST LLPKLLKKSV
Sequences:
>Translated_170_residues MAFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVSTQAYTSVSIVLGTITTLPFTLLLTENWQ ISLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSVDANISGVLVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGST LLPKLLKKSV >Mature_169_residues AFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVSTQAYTSVSIVLGTITTLPFTLLLTENWQI SLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSVDANISGVLVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGSTL LPKLLKKSV
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y976A_HAEIN (O86230)
Other databases:
- EMBL: L42023 - RefSeq: NP_439139.1 - GeneID: 949978 - GenomeReviews: L42023_GR - KEGG: hin:HI0976.1 - NMPDR: fig|71421.1.peg.943 - TIGR: HI_0976.1 - GO: GO:0006810 - InterPro: IPR000620
Pfam domain/function: PF00892 DUF6
EC number: NA
Molecular weight: Translated: 17973; Mature: 17841
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd79ad50)-; HASH(0xd25d324)-; HASH(0xdc54100)-; HASH(0xdcadcb8)-; HASH(0xdc54220)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVSTQAYTSVS CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVLGTITTLPFTLLLTENWQISLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSVDANISGV HHHHHHHHHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGSTLLPKLLKKSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure AFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVSTQAYTSVS CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVLGTITTLPFTLLLTENWQISLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSVDANISGV HHHHHHHHHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGSTLLPKLLKKSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800