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The map label for this gene is ygfA [C]

Identifier: 16272798

GI number: 16272798

Start: 906285

End: 906848

Strand: Direct

Name: ygfA [C]

Synonym: HI0858

Alternate gene names: 16272798

Gene position: 906285-906848 (Clockwise)

Preceding gene: 16272797

Following gene: 16272799

Centisome position: 49.52

GC content: 37.06

Gene sequence:

>564_bases
ATGAATACTCAAAAACGCCAGCAAATCCGCACTGAAATCCGAAAAATACGTGCAAATTTAACCGCACTTCAACAGCACCA
AGCTGAACAATCGGTTACTCAACACGCGTTAAATCTTATCGAGCAACGACAAGCCAAAAATATTGCATTATATTTTTCTT
TTGATGGTGAAATTTCCACAAAAGCCTTAATCCAATCCCTGTGGATGCAAAATAAAAATGTGTATTTGCCTGTTTTACAT
CCTTTTACTAAACACTATTTATTGTTTTTACGCTATTTACCTGATACGCCAATGAAACAAAATCAGTTTGGCATTTGGGA
GCCAAAGCTAAATGTTCAAAATGTTTTGCCATTAAATGAACTGGATATTTTATTTACGCCATTGGTGGCTTTTGATAAAA
AAGGAAATCGCCTTGGTATGGGCGGTGGATTTTATGATCGCACGTTGCAGAATTGGCAAAATAAATCTTTTATTCCAGTG
GGGTTAGCGTACCAATGTCAGCAAGTAGAAAATCTTCCCACTGAGCATTGGGATGTGCCACTATTCGATATTTTGGTAGG
TTGA

Upstream 100 bases:

>100_bases
GGCTAAGAAACCTGAAAACGGTATCAACTGATTTCCTTGAACCGTCGGGTTCAAGGACTACTGCCCGCAGCGGCACTCTG
GGGTCTTCCTTTTCATTTCT

Downstream 100 bases:

>100_bases
AACCTATCATCAAATTTTTATTGATAGATAAAATCAAAATATTTCATTTTTTCTCTTGAAATTTATTCAACCGAGCTTAC
TTAGTTTATGCAAATGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHYLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG

Sequences:

>Translated_187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHYLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG
>Mature_187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHYLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family

Homologues:

Organism=Escherichia coli, GI1789278, Length=169, Percent_Identity=53.2544378698225, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y858_HAEIN (P44905)

Other databases:

- EMBL:   L42023
- PIR:   D64160
- RefSeq:   NP_439018.1
- ProteinModelPortal:   P44905
- GeneID:   949870
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0858
- NMPDR:   fig|71421.1.peg.826
- TIGR:   HI_0858
- HOGENOM:   HBG325345
- OMA:   YAHDCQQ
- ProtClustDB:   CLSK870587
- BioCyc:   HINF71421:HI_0858-MONOMER
- InterPro:   IPR002698
- Gene3D:   G3DSA:3.40.50.10420
- PANTHER:   PTHR23407:SF1
- PIRSF:   PIRSF006806
- TIGRFAMs:   TIGR02727

Pfam domain/function: PF01812 5-FTHF_cyc-lig

EC number: NA

Molecular weight: Translated: 21822; Mature: 21822

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: BINDING 178-178

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDGEIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH
KALIQSLWMQNKNVYLPVLHPFTKHYLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNE
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCH
LDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPVGLAYQCQQVENLPTEHWDVP
HHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCC
LFDILVG
HHHHHCC
>Mature Secondary Structure
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDGEIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH
KALIQSLWMQNKNVYLPVLHPFTKHYLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNE
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCH
LDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPVGLAYQCQQVENLPTEHWDVP
HHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCC
LFDILVG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023