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The map label for this gene is rseC [C]

Identifier: 16272790

GI number: 16272790

Start: 896738

End: 897172

Strand: Direct

Name: rseC [C]

Synonym: HI0850

Alternate gene names: 16272790

Gene position: 896738-897172 (Clockwise)

Preceding gene: 16273637

Following gene: 16272791

Centisome position: 49.0

GC content: 37.24

Gene sequence:

>435_bases
ATGCTAAGAGAAAGTGCCGTTGTTATTAGCTATGAAAATGGCATTGCCAAAGTGAAATGCCAATCCCAAAGTGCCTGTGG
CCAATGCGCAGCTAAAAACAGTTGTGGAACATCAAGCCTTTCCGAATTAAACGGTAAACGTGGCGAGCATATTTTTAATG
TGGAAACATTAATGCCATTACGCGAAGGTCAAATTGTTGAAATTGGATTAGAAGAAAAGTCGATGTTGTTGTCGGCATTA
TTGATGTATGTTGTACCGCTTTTGACCTTATTGATTGTGACTATGTTGTCCGATTACATAAGCGATAATGAAATTCTGCG
TGCCATTTTAATCTTTGGATTAACCGCACTTTCTTTCATTTTGGTAAAATCTTATAGCAGAAAATTAGGGCAACAAACAG
AATTTCAGCCTGTTTTATTGCGTGTATTATCTTGA

Upstream 100 bases:

>100_bases
TGAAGCGTCCTGACTATGCGGAATTTCTTTGTGGAAAACAACCGCACTTTAGCCATGAAACGAAAAATCATCGCTTTGAT
ATTTATATGGGAGCATCCCA

Downstream 100 bases:

>100_bases
GTTTTTTACTCGCTTTTTATTATTACTGCGATTTAGATCGCAAACTATAAAGCTAGTTATTTAAATTACCCATTGAAAAA
AGCTCTTTAGAGGCTTGGTC

Product: sigma-E factor regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFILVKSYSRKLGQQTEFQPVLLRVLS

Sequences:

>Translated_144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFILVKSYSRKLGQQTEFQPVLLRVLS
>Mature_144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFILVKSYSRKLGQQTEFQPVLLRVLS

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family

Homologues:

Organism=Escherichia coli, GI1788923, Length=144, Percent_Identity=36.8055555555556, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y850_HAEIN (P44060)

Other databases:

- EMBL:   L42023
- PIR:   F64014
- RefSeq:   NP_439010.1
- GeneID:   949863
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0850
- NMPDR:   fig|71421.1.peg.818
- TIGR:   HI_0850
- HOGENOM:   HBG678543
- OMA:   GSAMLVY
- ProtClustDB:   CLSK870614
- BioCyc:   HINF71421:HI_0850-MONOMER
- InterPro:   IPR007359

Pfam domain/function: PF04246 RseC_MucC

EC number: NA

Molecular weight: Translated: 15842; Mature: 15842

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd83dc28)-; HASH(0xd121320)-;

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPL
CCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHCCCCCCEEECHHHHCCC
REGQIVEIGLEEKSMLLSALLMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LVKSYSRKLGQQTEFQPVLLRVLS
HHHHHHHHHCCCCCHHHHHHHHCH
>Mature Secondary Structure
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPL
CCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHCCCCCCEEECHHHHCCC
REGQIVEIGLEEKSMLLSALLMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LVKSYSRKLGQQTEFQPVLLRVLS
HHHHHHHHHCCCCCHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800