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The map label for this gene is yifE [C]

Identifier: 16272788

GI number: 16272788

Start: 894419

End: 894754

Strand: Direct

Name: yifE [C]

Synonym: HI0847

Alternate gene names: 16272788

Gene position: 894419-894754 (Clockwise)

Preceding gene: 16272787

Following gene: 16272789

Centisome position: 48.87

GC content: 42.86

Gene sequence:

>336_bases
ATGGCTGCAAGTTTTAGCGTAACGCGTCGTTTCTTTGACGACAAAAACTACCCACGTGGTTTTTCCCGTCACGGTGATTA
CACAATTAAAGAATCACAGGTGCTTGAGCAATATGGTCAAGCGTTCAAAGCATTAGACTTAGGGGAACGTGAGCCAGCGA
CTAAAGAAGAAAAAGATTTCGTCGCATTTTGCCGTGGTGAGCGCGCAGCAGAGACTTTCTTTGAAAAAACTTGGAATAAA
TATCGTACTCGTATTAACACTAAAAAACGTGTTTACACCTTATCTAGTGATGTGAGTGAAGCTGCCTCTGGCGGTGAAGA
TTATTCCGGCGAATAA

Upstream 100 bases:

>100_bases
GATTATGTGCAAACCGTAAAAGGTTTATTGCAAAAATAACGAAAAATTGGTTTAATGCCAGCCCTATTTTGTAAATATTA
ATGAAAGAAGAGAGAATATT

Downstream 100 bases:

>100_bases
GATACGTTAAATAAGGCAGGCGGAAGTCTGCCTTTTGTTTTTGAATAGCTTGTGAAATCACGCGTAATTCACGGCTGATA
ACTTTATTCTCCTATCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNK
YRTRINTKKRVYTLSSDVSEAASGGEDYSGE

Sequences:

>Translated_111_residues
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNK
YRTRINTKKRVYTLSSDVSEAASGGEDYSGE
>Mature_110_residues
AASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNKY
RTRINTKKRVYTLSSDVSEAASGGEDYSGE

Specific function: Not known, a mutation in ORF3 causes a slight decrease in transformation efficiency

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family

Homologues:

Organism=Escherichia coli, GI2367277, Length=109, Percent_Identity=59.6330275229358, Blast_Score=134, Evalue=2e-33,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): Y847_HAEIN (P31811)

Other databases:

- EMBL:   M94205
- EMBL:   L42023
- PIR:   H64159
- RefSeq:   NP_439007.1
- GeneID:   950632
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0847
- TIGR:   HI_0847
- HOGENOM:   HBG297174
- OMA:   RRPKRFH
- ProtClustDB:   PRK11027
- BioCyc:   HINF71421:HI_0847-MONOMER
- InterPro:   IPR007335

Pfam domain/function: PF04219 DUF413

EC number: NA

Molecular weight: Translated: 12805; Mature: 12674

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDF
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VAFCRGERAAETFFEKTWNKYRTRINTKKRVYTLSSDVSEAASGGEDYSGE
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDF
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VAFCRGERAAETFFEKTWNKYRTRINTKKRVYTLSSDVSEAASGGEDYSGE
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1438213; 7542800; 10675023