Click here to switch to the map view.

The map label for this gene is yihD [C]

Identifier: 16272786

GI number: 16272786

Start: 893463

End: 893729

Strand: Direct

Name: yihD [C]

Synonym: HI0845

Alternate gene names: 16272786

Gene position: 893463-893729 (Clockwise)

Preceding gene: 16272784

Following gene: 16272787

Centisome position: 48.82

GC content: 31.46

Gene sequence:

>267_bases
ATGAAATGTAAGCGTTTAAATGAAGTTTTGGAACTTTTACAGTCTTATTGGTCTAAAGACTCGGATTTGAGTTTAATGGA
AATTTTGCAAAAAATTGCCAATGAATCAGGTTTCCAAAAACCATTAAATGAATTAACTGATGAAGTGATTATTTATCAGT
TAAAAATGGATGGTACAGATAAATATGAGCCAATTCCTGGTCTCAAAAAAGATTACGAAGAAGATTTTAAAACCGCATTG
CTCCGTGCTCGCGGTATCATTAAATAA

Upstream 100 bases:

>100_bases
ATTGTAATTGTCATATTTTAATCTATCATTATTTCAAGTATCATTTGCCTATTTTTTACGATTAAAAAGGAAATAGCAAT
GAAATAAAAAGGAAATAGCA

Downstream 100 bases:

>100_bases
GAGGAAAGAAATGAAAAAAGTATTACTTGCGTTAGGTTTAGGTGTCAGCACGCTTATGTCTGTAAATAGTTTTGCCGCAG
ATTTACAAGAAGGCAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKCKRLNEVLELLQSYWSKDSDLSLMEILQKIANESGFQKPLNELTDEVIIYQLKMDGTDKYEPIPGLKKDYEEDFKTAL
LRARGIIK

Sequences:

>Translated_88_residues
MKCKRLNEVLELLQSYWSKDSDLSLMEILQKIANESGFQKPLNELTDEVIIYQLKMDGTDKYEPIPGLKKDYEEDFKTAL
LRARGIIK
>Mature_88_residues
MKCKRLNEVLELLQSYWSKDSDLSLMEILQKIANESGFQKPLNELTDEVIIYQLKMDGTDKYEPIPGLKKDYEEDFKTAL
LRARGIIK

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihD

Homologues:

Organism=Escherichia coli, GI1790289, Length=88, Percent_Identity=65.9090909090909, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y845_HAEIN (P44900)

Other databases:

- EMBL:   M94205
- EMBL:   L42023
- PIR:   G64159
- RefSeq:   NP_439005.1
- ProteinModelPortal:   P44900
- GeneID:   950597
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0845
- NMPDR:   fig|71421.1.peg.813
- TIGR:   HI_0845
- HOGENOM:   HBG297175
- OMA:   CHRIEEL
- ProtClustDB:   CLSK870621
- BioCyc:   HINF71421:HI_0845-MONOMER
- InterPro:   IPR009383
- ProDom:   PD029038

Pfam domain/function: PF06288 DUF1040

EC number: NA

Molecular weight: Translated: 10282; Mature: 10282

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKRLNEVLELLQSYWSKDSDLSLMEILQKIANESGFQKPLNELTDEVIIYQLKMDGTD
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
KYEPIPGLKKDYEEDFKTALLRARGIIK
CCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCKRLNEVLELLQSYWSKDSDLSLMEILQKIANESGFQKPLNELTDEVIIYQLKMDGTD
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
KYEPIPGLKKDYEEDFKTALLRARGIIK
CCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1438213; 7542800