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The map label for this gene is codA [C]

Identifier: 16272783

GI number: 16272783

Start: 891668

End: 892498

Strand: Direct

Name: codA [C]

Synonym: HI0842

Alternate gene names: 16272783

Gene position: 891668-892498 (Clockwise)

Preceding gene: 16272782

Following gene: 16272784

Centisome position: 48.72

GC content: 39.71

Gene sequence:

>831_bases
ATGAAAAGCCATGTTCGTAGTTTTAAAACCTATATTCGCGATGAAATTATCAAAAAAGGCGGGTGGGTAAATGCCCATGC
TCATGCTGACCGCGCTTTTACGATGACGCCAGAGAAAATTGGGATTTATCATAGTAGTAATTTGCAACAAAAATGGGATT
TAGTGGATGAAGTAAAACGCACTTCCAGTGTTGATGATTATTACGCACGTTTTTGCCAATCTATTGAATTAATGATATCC
CAAGGTGTAACCGCATTTGGTACTTTTGTCGATATAGACCCAATTTGTGAAGATCGTGCAATTATTGCCGCACACAAAGC
CCGCGAAGTGTATAAACATGACATTATTTTAAAATTTGCCAATCAAACTTTAAAAGGGGTAATCGAACCCACTGCGCGTA
AATGGTTTGATATTGGTGCAGAAATGGTAGATATGATTGGTGGCTTACCATATCGTGATGAATTGGATTATGGACGTGGC
TTAGAAGCGATGGATATCTTGTTAGATAAGGCCAAATCTCTTGGAATTATGTGTCATGTACATGTAGACCAATTCAACAA
TCCAAGTGAAAAAGAAACCGAGCAACTTTGCGACAAAACCATTGAACACGGAATGGAGGGGCGAGTTGTAGGTATCCATG
GTATTTCCATTGGCTCACATTCAAAAGAATATCGCTACAAACTTTACGAAAAAATGCGTAAAGCCAAAATGATGATGATA
GCCTGTCCTATGGCATGGATTGACAGTAATCGCAAAGAAGATCTTATGCCATTCCATAATGCGCTCACGCCAGCAGATGA
AATGATCCCCGAAGTATCACTGTTGCCCTAG

Upstream 100 bases:

>100_bases
TTTTTCATAACATTATCATAATGCTTCTCGCCGTACTTACAGTACCTTTCAATTAATATACATTCTCGTCTTTTTATCCT
TTCTTTTTTACGGAGTTTGT

Downstream 100 bases:

>100_bases
GCACAGATAATATTTGTGATTACATGGTTCCTCTATGTGAAGGCGATTTATGGCAAGAATTAAGCCTATTAGCTGCTGGC
TGCCGTTTCCCACACTTAGA

Product: hypothetical protein

Products: ammonia; Uracil [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKSHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKIGIYHSSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVIEPTARKWFDIGAEMVDMIGGLPYRDELDYGRG
LEAMDILLDKAKSLGIMCHVHVDQFNNPSEKETEQLCDKTIEHGMEGRVVGIHGISIGSHSKEYRYKLYEKMRKAKMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEVSLLP

Sequences:

>Translated_276_residues
MKSHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKIGIYHSSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVIEPTARKWFDIGAEMVDMIGGLPYRDELDYGRG
LEAMDILLDKAKSLGIMCHVHVDQFNNPSEKETEQLCDKTIEHGMEGRVVGIHGISIGSHSKEYRYKLYEKMRKAKMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEVSLLP
>Mature_276_residues
MKSHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKIGIYHSSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVIEPTARKWFDIGAEMVDMIGGLPYRDELDYGRG
LEAMDILLDKAKSLGIMCHVHVDQFNNPSEKETEQLCDKTIEHGMEGRVVGIHGISIGSHSKEYRYKLYEKMRKAKMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEVSLLP

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y842_HAEIN (P44058)

Other databases:

- EMBL:   L42023
- PIR:   D64014
- RefSeq:   NP_439002.1
- ProteinModelPortal:   P44058
- GeneID:   949857
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0842
- NMPDR:   fig|71421.1.peg.810
- TIGR:   HI_0842
- HOGENOM:   HBG296692
- OMA:   KGGWVNA
- BioCyc:   HINF71421:HI_0842-MONOMER

Pfam domain/function: NA

EC number: 3.5.4.1 [C]

Molecular weight: Translated: 31571; Mature: 31571

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKIGIYHSSNLQQKWDLVDEVKR
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECHHHHEEEECCCCHHHHHHHHHHHH
TSSVDDYYARFCQSIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFA
HCCCHHHHHHHHHHHHHHHHCCCHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NQTLKGVIEPTARKWFDIGAEMVDMIGGLPYRDELDYGRGLEAMDILLDKAKSLGIMCHV
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
HVDQFNNPSEKETEQLCDKTIEHGMEGRVVGIHGISIGSHSKEYRYKLYEKMRKAKMMMI
EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEVSLLP
CCCHHHHCCCCCCCCCHHHHCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MKSHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKIGIYHSSNLQQKWDLVDEVKR
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECHHHHEEEECCCCHHHHHHHHHHHH
TSSVDDYYARFCQSIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFA
HCCCHHHHHHHHHHHHHHHHCCCHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NQTLKGVIEPTARKWFDIGAEMVDMIGGLPYRDELDYGRGLEAMDILLDKAKSLGIMCHV
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
HVDQFNNPSEKETEQLCDKTIEHGMEGRVVGIHGISIGSHSKEYRYKLYEKMRKAKMMMI
EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEVSLLP
CCCHHHHCCCCCCCCCHHHHCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Cytosine; H+; H2O [C]

Specific reaction: Cytosine + H+ + H2O --> ammonia + Uracil [C]

General reaction: Amidine hydrolysis [C]

Inhibitor: 5-Bromo-2-pyrimidone; CDP; CMP; CTP; GDP; GMP; GTP; Guanosine; Thymidine; TTP [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800