| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272747
Identifier: 16272747
GI number: 16272747
Start: 855169
End: 855975
Strand: Direct
Name: 16272747
Synonym: HI0806
Alternate gene names: NA
Gene position: 855169-855975 (Clockwise)
Preceding gene: 16272745
Following gene: 16272762
Centisome position: 46.73
GC content: 33.83
Gene sequence:
>807_bases ATGGCGTTTAGTACAATTTTTATCTTACTGATTTGCGGTATTTGTACCAATATGGTTTCTGCTATTTTTGGTATTGGCGG TGGGGTATTGATGGTGCCAATTTTACGTACGTTATTTCCCGAATTGCCGATTCAAGTTATTTCAGCTACGTCACTCACCA TTGTGATGTGTACCGCATTGATTAATTTATTATTTTTCCATAAGCAAAAAATTAAAATTGATTATATCAATATGATTTTA TGGTCTATTGCTATGGTGATTGGGGTGCAAATTGGTTTTGAATTAAGTTTTTATTTTTCTACAGCGATAATTAGTTTAAT TTTTACGGTTAGTTTAAGTGCACTAGCGATTAAAACATTTTTAAACAGATCGAGAATACAAATAGAAGTGTTTAATATGT CTCCTATAGAACGAGCTAAAGGTAGTATTAGTTTTTGTGGAGGAGGCTTAATTGCGGGTATTACAGGTATTGGAGGCGGT TCTATTCTTGCGCCCCTTGTCGGGCAATTAAAGGGGGTAAAAACGCAACAAATTGCCGTTTATACGAACTATATGATGAT TATTGGTGGTATTGGTAATTTATATGGCTATCTCACAAGAGCTTTTCTTTATGATGCCAGTCTAAGTGGCCAACTAGGAT TAAACTTTCTTGTAGTTGGTGTCGTTACCTTGGGTTCATTTGAAATGAGTTTCTTCTCAATGAAATTGCGTGGATTAATG AATCCAGTTTTAACAAGAAAATTATTGGCGATTATTTTATTTTGTATTGCAGCCTATATGTGCATTTTGGAATTTGTATT CCATTAA
Upstream 100 bases:
>100_bases CAGAATAATTTTAACTGTATATGATAGCGATCATAAGTTGCGCATATGCTCTTACGTCAAAATGAAGTATGATTAAATGA ATTTTTAAATAGGATCTAAG
Downstream 100 bases:
>100_bases ATCGAATAAACTAGACCTAGTTATTCTAGGTCTATTCTCTAAGTAGTGTTTTCGCAATCTCTCTTGCTTGTGCATCAATT TCGAGTACATCATCAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFHKQKIKIDYINMIL WSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGG SILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLGLNFLVVGVVTLGSFEMSFFSMKLRGLM NPVLTRKLLAIILFCIAAYMCILEFVFH
Sequences:
>Translated_268_residues MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFHKQKIKIDYINMIL WSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGG SILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLGLNFLVVGVVTLGSFEMSFFSMKLRGLM NPVLTRKLLAIILFCIAAYMCILEFVFH >Mature_267_residues AFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFHKQKIKIDYINMILW SIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGS ILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLGLNFLVVGVVTLGSFEMSFFSMKLRGLMN PVLTRKLLAIILFCIAAYMCILEFVFH
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y806_HAEIN (P44054)
Other databases:
- EMBL: L42023 - PIR: I64013 - RefSeq: NP_438966.1 - GeneID: 949820 - GenomeReviews: L42023_GR - KEGG: hin:HI0806 - NMPDR: fig|71421.1.peg.774 - TIGR: HI_0806 - HOGENOM: HBG495035 - OMA: GGSIMAP - ProtClustDB: CLSK870166 - BioCyc: HINF71421:HI_0806-MONOMER - InterPro: IPR002781
Pfam domain/function: PF01925 DUF81
EC number: NA
Molecular weight: Translated: 29138; Mature: 29007
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd67a8f4)-; HASH(0xc9c2164)-; HASH(0xd5f4788)-; HASH(0xc417164)-; HASH(0xc4a733c)-; HASH(0xd0ef75c)-; HASH(0xd82b8b4)-; HASH(0xda69524)-;
Cys/Met content:
2.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTAL CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH INLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQIAV HCCCEEEEEEECCCCHHHCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEH YTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLGLNFLVVGVVTLGSFEMSFFSMKLRGLM HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH NPVLTRKLLAIILFCIAAYMCILEFVFH HHHHHHHHHHHHHHHHHHHHHHHHHHHH >Mature Secondary Structure AFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTAL CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH INLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQIAV HCCCEEEEEEECCCCHHHCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEH YTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLGLNFLVVGVVTLGSFEMSFFSMKLRGLM HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH NPVLTRKLLAIILFCIAAYMCILEFVFH HHHHHHHHHHHHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800