| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is ilvD [H]
Identifier: 16272679
GI number: 16272679
Start: 792641
End: 794479
Strand: Direct
Name: ilvD [H]
Synonym: HI0738
Alternate gene names: 16272679
Gene position: 792641-794479 (Clockwise)
Preceding gene: 16272678
Following gene: 16272680
Centisome position: 43.31
GC content: 43.45
Gene sequence:
>1839_bases ATGCCCAAACTACGTTCAGCGACCAGCACACAAGGTCGTAATATGGCAGGCGCACGTGCCTTATGGCGTGCAACAGGAAT GAAAGAAAATGACTTTGGTAAACCGATTATTGCGGTGGTGAACTCTTTCACGCAATTCGTACCAGGGCATGTGCATTTAA AAGATATGGGACAGCTTGTTGCCGCAGAAATAGAAAAAGCGGGCGGCGTAGCAAAAGAATTTAACACCATTGCGGTGGAT GATGGTATCGCAATGGGTCACGGTGGAATGCTTTATTCTTTACCAAGCCGTGATTTAATCGCTGATAGCGTGGAATATAT GGTCAATGCACACTGTGCTGATGCGATGGTGTGTATTTCTAACTGTGACAAAATCACCCCGGGAATGTTAATGGCGGCAA TGCGCTTAAACATTCCGACAATTTTTGTTTCAGGCGGCCCAATGGAAGCGGGCAAAACAAAACTTTCTGATCAATTAATC CGCTTAGATTTGGTTGATGCGATGATTGAGGCAGCCGATCCGAATGTATCAGATGAACGTATTGATGCCATCGAACGCAG TGCGTGTCCAACTTGTGGTTCATGTTCTGGTATGTTTACCGCTAACTCAATGAACTGCTTAACTGAAGCCTTAGGTTTAT CTTTACCTGGTAATGGTTCTATGTTAGCCACTCACGCAGACCGTAAAGAATTATTCTTAAAAGCAGGTCGTCAAATTGTC GAGCTTTGCAAACGCTATTATGAACAAGATGATGCAAGCGTATTGCCTCGTTCAATCGGTACTTTTGATGCCTTTGAAAA TGCAATGAGCCTCGATATCGCAATGGGTGGTTCAAGTAACACTGTTTTACACTTATTAGCGGCAGCACAAGAAGCAGGCG TGGATTTTAAAATGGAAGATATTGACCGTTTATCGCGCAAAGTGCCTTGTTTAAGCAAAATTGCACCAAACACCAATAAA TATCATATGGAAGACGTACACCGTGCAGGCGGTATTATGGGATTGTTGGGTGAATTAGATCGTGCTGGATTAATTCATAA AAATACACACACCGTGCTTGGAATGAGCATGGGAGAGCAACTAGACCAATACGATATTATTCGCAATCAAGATGAAGAAT TACATAAATTCTTCCGTGCAGGCCCTGCAGGTATCCGCACAACTCAAGCATTCTCACAAGATTGCCGCTGGGATACCGTT GATAATGATCGTGTAAACGGTTGTATTCGCAATAAAGAAAATGCGATTTCACAAGAAGGTGGCTTAGCCGTATTATTCGG TAATCTCGCTGAAGACGGATGTATCGTTAAAACCGCTGGTGTAGATGAATCTATTTGGAAATTCACTGGCACGGCAATCG TATTTGAAAGCCAAGAAGATGCGGTTGCAGGCATTTTAGGTGGCAAAGTCAAAGAAGGTCATGTTGTTGTTATCCGTTAC GAAGGGCCTAAAGGCGGACCAGGTATGCAAGAAATGTTATACCCAACCAGTTACTTAAAATCGATGGGCTTGGGCAAAAA ATGCGCTTTATTAACGGATGGTCGCTTCTCTGGCGGTACATCAGGCTTGTCTATTGGACATGTTTCACCAGAAGCTGCTT CTGGCGGTGCAATCGGCTTAGTACGCAATGGCGATATTATCAACATTGATATTCCAAACCGTGCAATTAACTTAGAAATC AGTAATGAAGAACTCGCAACACGCAGAGCCGAACAAGATCAAAAAGGTTGGCAGCCAGCTAACCGTGAACGTGAAGTATC TTTCGCTTTAAAAGTATTCGGTCACTTTGCGACCTCAGCGGACAAAGGTGCGGTACGCGATAAAACATTATTAAAATAA
Upstream 100 bases:
>100_bases AGCTGCCGGATGTTTTAATGGTTAATTAAGAATATTTTATCAATTAACGAAGAAATTAATCATACAAACGAACCCTAAAT TTTACTCGGAGAGATTATTT
Downstream 100 bases:
>100_bases TTTAACGGTTCCCCTCTTTCATAAGAGGGGGATAAAACAAAGGAAAAACTAACCGCACTTTATCATCAAAACAAACACTA TGAAAAATCTACTCACCAAT
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI RLDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGVDFKMEDIDRLSRKVPCLSKIAPNTNK YHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTV DNDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHVSPEAASGGAIGLVRNGDIINIDIPNRAINLEI SNEELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK
Sequences:
>Translated_612_residues MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI RLDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGVDFKMEDIDRLSRKVPCLSKIAPNTNK YHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTV DNDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHVSPEAASGGAIGLVRNGDIINIDIPNRAINLEI SNEELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK >Mature_611_residues PKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDD GIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIR LDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIVE LCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGVDFKMEDIDRLSRKVPCLSKIAPNTNKY HMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVD NDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRYE GPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHVSPEAASGGAIGLVRNGDIINIDIPNRAINLEIS NEELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=614, Percent_Identity=77.6872964169381, Blast_Score=1013, Evalue=0.0, Organism=Escherichia coli, GI2367371, Length=560, Percent_Identity=30.5357142857143, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1788157, Length=565, Percent_Identity=28.8495575221239, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI1786464, Length=523, Percent_Identity=31.7399617590822, Blast_Score=189, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6322476, Length=605, Percent_Identity=36.8595041322314, Blast_Score=348, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 65824; Mature: 65693
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCIS HHHHHHHCCCHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIRLDLVDAMIEAADPNVSDER CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH IDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGVDFKMED HHHHHHHCCCCHHHCCHHCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH IDRLSRKVPCLSKIAPNTNKYHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQ HHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEEECHHHHH LDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVDNDRVNGCIRNKENAISQEG HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCCCC GLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY CEEEEECCCCCCCEEEEECCCCHHHHHEECCEEEEECCCCHHHHHHCCCCCCCCEEEEEE EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHVSPEAASGGAIGL CCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEE VRNGDIINIDIPNRAINLEISNEELATRRAEQDQKGWQPANREREVSFALKVFGHFATSA EECCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DKGAVRDKTLLK CCCCCCCHHCCC >Mature Secondary Structure PKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLV CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCIS HHHHHHHCCCHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIRLDLVDAMIEAADPNVSDER CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH IDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGVDFKMED HHHHHHHCCCCHHHCCHHCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH IDRLSRKVPCLSKIAPNTNKYHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQ HHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEEECHHHHH LDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVDNDRVNGCIRNKENAISQEG HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCCCC GLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY CEEEEECCCCCCCEEEEECCCCHHHHHEECCEEEEECCCCHHHHHHCCCCCCCCEEEEEE EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHVSPEAASGGAIGL CCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEE VRNGDIINIDIPNRAINLEISNEELATRRAEQDQKGWQPANREREVSFALKVFGHFATSA EECCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DKGAVRDKTLLK CCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA