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The map label for this gene is secE

Identifier: 16272656

GI number: 16272656

Start: 765122

End: 765442

Strand: Direct

Name: secE

Synonym: HI0716

Alternate gene names: 16272656

Gene position: 765122-765442 (Clockwise)

Preceding gene: 16272655

Following gene: 16272657

Centisome position: 41.81

GC content: 38.63

Gene sequence:

>321_bases
GTGATCTTTTTTGCTGCTGCGGCAATTGGGAATATTTATTTCCAACAAATCTATTCTTTACCGATTCGTGTTATTGGTAT
GGCTATTGCATTAGTCATTGCATTTATTTTAGCGGCAATTACTAATCAAGGAACAAAAGCACGTGCGTTCTTTAATGACT
CTCGTACAGAAGCGCGTAAAGTCGTATGGCCAACCCGTGCTGAAGCGCGTCAAACAACATTGATCGTTATCGGGGTAACA
ATGATTGCTTCTCTCTTCTTTTGGGCAGTAGATTCGATTATTGTGACAGTGATTAATTTCTTAACTGATTTGAGATTCTA
A

Upstream 100 bases:

>100_bases
ATTCTATGGCAACCGAAATTGTTGATAAAAAGAAAAATACGCAAGAAGTGATCGTGAAGGCAAGTCTAAAGGTTTAAATA
CATTCCTTTGGGTTTTAGTT

Downstream 100 bases:

>100_bases
AATGACTGAAGAAACAACAGTATCAAAAAAACGTTGGTATGTATTACAAGCGTTTTCTGGCTTTGAAAGTCGTGTAGCTC
TAACTTTACGTGAATACATC

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MIFFAAAAIGNIYFQQIYSLPIRVIGMAIALVIAFILAAITNQGTKARAFFNDSRTEARKVVWPTRAEARQTTLIVIGVT
MIASLFFWAVDSIIVTVINFLTDLRF

Sequences:

>Translated_106_residues
MIFFAAAAIGNIYFQQIYSLPIRVIGMAIALVIAFILAAITNQGTKARAFFNDSRTEARKVVWPTRAEARQTTLIVIGVT
MIASLFFWAVDSIIVTVINFLTDLRF
>Mature_106_residues
MIFFAAAAIGNIYFQQIYSLPIRVIGMAIALVIAFILAAITNQGTKARAFFNDSRTEARKVVWPTRAEARQTTLIVIGVT
MIASLFFWAVDSIIVTVINFLTDLRF

Specific function: Essential for protein export

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

Organism=Escherichia coli, GI1790413, Length=97, Percent_Identity=43.298969072165, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_HAEIN (P43805)

Other databases:

- EMBL:   L42023
- PIR:   F64088
- RefSeq:   NP_438874.1
- GeneID:   949943
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0716
- NMPDR:   fig|71421.1.peg.684
- TIGR:   HI_0716
- HOGENOM:   HBG701403
- OMA:   TANTMYG
- ProtClustDB:   PRK05740
- BioCyc:   HINF71421:HI_0716-MONOMER
- InterPro:   IPR001901
- InterPro:   IPR005807
- PRINTS:   PR01650
- TIGRFAMs:   TIGR00964

Pfam domain/function: PF00584 SecE

EC number: NA

Molecular weight: Translated: 11817; Mature: 11817

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd2da9d4)-; HASH(0xd2d8f38)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFFAAAAIGNIYFQQIYSLPIRVIGMAIALVIAFILAAITNQGTKARAFFNDSRTEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
VVWPTRAEARQTTLIVIGVTMIASLFFWAVDSIIVTVINFLTDLRF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MIFFAAAAIGNIYFQQIYSLPIRVIGMAIALVIAFILAAITNQGTKARAFFNDSRTEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
VVWPTRAEARQTTLIVIGVTMIASLFFWAVDSIIVTVINFLTDLRF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800