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The map label for this gene is lppB

Identifier: 16272644

GI number: 16272644

Start: 749015

End: 749593

Strand: Direct

Name: lppB

Synonym: HI0703

Alternate gene names: NA

Gene position: 749015-749593 (Clockwise)

Preceding gene: 16272643

Following gene: 16272645

Centisome position: 40.93

GC content: 41.62

Gene sequence:

>579_bases
ATGAAAATTTTCGGCACGATGTACGATAAAACGATGGAATGGTCAAAACATCGTTTTGCTGTTTTTTGGCTCTCTTTTGT
AAGTTTTATCGAGGCGATATTTTTTCCTATTCCGCCCGATGTGATGCTGATCCCAATGTCTATGTCAAAGCCAAAAAGTG
CGGTGAAATTTGCATTTTATACGGCAATTGCGTCTGTAATCGGCGGAATTATCGGTTATGCTATTGGTTTTTATGCAACG
GACTGGGTGGAAAACATTGTGCAACAATGGGGATATGCTGCGCATTGGGCAAAAGCCGTCAGTTGGTTTGAGCAATGGGG
CGTATTAGTTGTGTTTGTGGCGGGTTTTAGCCCAATTCCTTACAAGGTGTTTACGCTCTGCGCTGGAGTAATGCAAATGG
CATTTTTCCCTTTTGTTATCACCGCATTTGTTTCACGTTTAGCGCGTTTCTTGCTAGTAGCAAAATTAGCTGCATGGGGC
GGTGAAAAATTCGCAGCAAAATTGCGAAAATCTATTGAGATTATTGGCTGGTCAGTGGTTGTACTGGCTGTAATCGCTTA
TTTTATACTGAAAAATTAG

Upstream 100 bases:

>100_bases
ATGTGTCTATCACACCAATTCAAGCGGATCTTACCGCATATCATTCATTGCTTTCTTTGCAAAATTGGTTAGATCAGGAA
TTTACCAAATAGAGAAAAAT

Downstream 100 bases:

>100_bases
GATAGAAAATGAACAAATTAAGTCTTGTTTTAGTAGCTGGATTTCTTTTGGTTGGATGTGCATCTGAATCAGTTAAAGAT
CCAGACGCATTACCAAATGG

Product: lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKIFGTMYDKTMEWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAVSWFEQWGVLVVFVAGFSPIPYKVFTLCAGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWSVVVLAVIAYFILKN

Sequences:

>Translated_192_residues
MKIFGTMYDKTMEWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAVSWFEQWGVLVVFVAGFSPIPYKVFTLCAGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWSVVVLAVIAYFILKN
>Mature_192_residues
MKIFGTMYDKTMEWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAVSWFEQWGVLVVFVAGFSPIPYKVFTLCAGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWSVVVLAVIAYFILKN

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y703_HAEIN (P44832)

Other databases:

- EMBL:   L42023
- PIR:   E64087
- RefSeq:   NP_438862.1
- GeneID:   949729
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0703
- NMPDR:   fig|71421.1.peg.672
- TIGR:   HI_0703
- HOGENOM:   HBG313940
- OMA:   RLYDWTM
- ProtClustDB:   CLSK870544
- BioCyc:   HINF71421:HI_0703-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 21688; Mature: 21688

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFGTMYDKTMEWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH
TAIASVIGGIIGYAIGFYATDWVENIVQQWGYAAHWAKAVSWFEQWGVLVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTLCAGVMQMAFFPFVITAFVSRLARFLLVAKLAAWGGEKFAAKLRKSIEIIGWSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLAVIAYFILKN
HHHHHHHHHHCC
>Mature Secondary Structure
MKIFGTMYDKTMEWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH
TAIASVIGGIIGYAIGFYATDWVENIVQQWGYAAHWAKAVSWFEQWGVLVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTLCAGVMQMAFFPFVITAFVSRLARFLLVAKLAAWGGEKFAAKLRKSIEIIGWSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLAVIAYFILKN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800