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The map label for this gene is 16272470

Identifier: 16272470

GI number: 16272470

Start: 549638

End: 550456

Strand: Reverse

Name: 16272470

Synonym: HI0526

Alternate gene names: NA

Gene position: 550456-549638 (Counterclockwise)

Preceding gene: 16272472

Following gene: 16272469

Centisome position: 30.08

GC content: 37.0

Gene sequence:

>819_bases
ATGAAAAAACTTACTTCCATTCTTTCTCTTATTGTTCTCGTTATATTAGCAATTTGGCAATATTTTACCGATACAACCAA
AACTAAACATCAATCATCTTCGCCCGTAATTGAGCAGACGAAGCAAACAAAAGTATCTGAGCCTAAATTTGAGCCTAAAT
TTGAGCCTAAATTTGAACCTAAATTCGAGCCTCAATTTGAGACAAAGCGGACGGATATTGAAAAAAGTGCGGTAAAAAAT
CCAGATGTTTTTGCAAACTATGATGTGATTATGCGCAATGATCATATTGGGCAAAATGCAAAGGCACCTGTCGATTATTA
TATGTTGGCATTATCTTGGTCGCCTGGATTTTGTGATATTCAGCGTGAAAAATATGGCGATCAGTTGCCTTATTCCTCTC
AATATCAATGTGGAAATAACCGCACTTTTGGTTGGGTTGTACATGGGCTATGGCCACAAAATGCAAATGCTCGCGCTGTT
TCAGATCATCCTCGTTTTTGCAAAGGCGATTTACCCGCCTTGCCAAAAGGTTTATTAGCACAATATTTGGCGATTTCTCC
GGGCGAGAAATTATTGCAAGGCGAATGGGAAAAACACGGTAGTTGCGCCTTTGATTCTGCCCAGCAATATTTTGCTAAGG
AGCAGGAATTATTTAACGCATTAAAATTACCGAATCAAAAATTAAGTAGAGATGAACTTTTTGGTTGGATGAAGCAACAT
AATCCACAATTAAAAAATGCGTATTTGAGGGCTAGTCGAAATGAATTATTTATTTGTTATGATAAAAAATGGCAGGTAAT
GAATTGCCAAAGCAAATAA

Upstream 100 bases:

>100_bases
TTGCTAGTGATGAGTAATGCCATTGTGATCCTTAATAGAGAGTTGAAAGCGGCGAATTATAGCCGACAAAAACTTGATTG
ACAAAAACTAAACAAAATTT

Downstream 100 bases:

>100_bases
GAATTTCTTTGATCTAAATCGTTACAACCTAGCACGAAGTAGGTATAATACGAAAAGTTTTCAATTTTAATTTTAATTTT
AACTTAACAAGAGGATAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKKLTSILSLIVLVILAIWQYFTDTTKTKHQSSSPVIEQTKQTKVSEPKFEPKFEPKFEPKFEPQFETKRTDIEKSAVKN
PDVFANYDVIMRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAV
SDHPRFCKGDLPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQH
NPQLKNAYLRASRNELFICYDKKWQVMNCQSK

Sequences:

>Translated_272_residues
MKKLTSILSLIVLVILAIWQYFTDTTKTKHQSSSPVIEQTKQTKVSEPKFEPKFEPKFEPKFEPQFETKRTDIEKSAVKN
PDVFANYDVIMRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAV
SDHPRFCKGDLPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQH
NPQLKNAYLRASRNELFICYDKKWQVMNCQSK
>Mature_272_residues
MKKLTSILSLIVLVILAIWQYFTDTTKTKHQSSSPVIEQTKQTKVSEPKFEPKFEPKFEPKFEPQFETKRTDIEKSAVKN
PDVFANYDVIMRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAV
SDHPRFCKGDLPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQH
NPQLKNAYLRASRNELFICYDKKWQVMNCQSK

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNase T2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RN26_HAEIN (P44012)

Other databases:

- EMBL:   L42023
- PIR:   C64009
- RefSeq:   NP_438684.1
- ProteinModelPortal:   P44012
- GeneID:   949589
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0526
- NMPDR:   fig|71421.1.peg.497
- TIGR:   HI_0526
- HOGENOM:   HBG296618
- OMA:   LLQGEWE
- ProtClustDB:   CLSK808418
- BioCyc:   HINF71421:HI_0526-MONOMER
- InterPro:   IPR001568
- InterPro:   IPR018188
- Gene3D:   G3DSA:3.90.730.10

Pfam domain/function: PF00445 Ribonuclease_T2; SSF55895 RNase_T2

EC number: NA

Molecular weight: Translated: 31482; Mature: 31482

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00530 RNASE_T2_1; PS00531 RNASE_T2_2

Important sites: ACT_SITE 148-148 ACT_SITE 195-195 ACT_SITE 199-199

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTSILSLIVLVILAIWQYFTDTTKTKHQSSSPVIEQTKQTKVSEPKFEPKFEPKFEP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
KFEPQFETKRTDIEKSAVKNPDVFANYDVIMRNDHIGQNAKAPVDYYMLALSWSPGFCDI
CCCCCCHHHHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
QREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAVSDHPRFCKGDLPALPKGLLA
CHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHH
QYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQH
HHHHCCCCHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
NPQLKNAYLRASRNELFICYDKKWQVMNCQSK
CCHHHHHHHHCCCCCEEEEECCCEEEECCCCC
>Mature Secondary Structure
MKKLTSILSLIVLVILAIWQYFTDTTKTKHQSSSPVIEQTKQTKVSEPKFEPKFEPKFEP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
KFEPQFETKRTDIEKSAVKNPDVFANYDVIMRNDHIGQNAKAPVDYYMLALSWSPGFCDI
CCCCCCHHHHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
QREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAVSDHPRFCKGDLPALPKGLLA
CHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHH
QYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQH
HHHHCCCCHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
NPQLKNAYLRASRNELFICYDKKWQVMNCQSK
CCHHHHHHHHCCCCCEEEEECCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800