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The map label for this gene is yqaA [C]

Identifier: 16272437

GI number: 16272437

Start: 508649

End: 509122

Strand: Direct

Name: yqaA [C]

Synonym: HI0489

Alternate gene names: 16272437

Gene position: 508649-509122 (Clockwise)

Preceding gene: 16272436

Following gene: 16272438

Centisome position: 27.79

GC content: 36.08

Gene sequence:

>474_bases
ATGGATATTTTTTCATTTTTTAGTGCTGATTTTTGGCAGGCTAATAGCTTATGCTTTATGTTTATCAGCGCGTTTTTGAG
TGCAACAGTATTACCAGGTAATTCAGAAGTTATATTTGTTGCGCTTGCTGTACCTAAATTAATGTTAGGTTCTTTATTTA
ACGTAGATATATTAGCTCTAATATTGATTGCAACCGCTGGAAATAGCTTAGGAAGTTTAACCACTTACGGAATTGGACGA
TGGATGCCAAAATTCGATCCCAAAAATTACCGCACTTTATGGGCAATAAATCAGCTACGGCGTTATGGGGCGATTGCTTT
ACTTTTGAGCTGGCTGCCTGTAGTTGGCGATTTATTTTGTGCCATAGCTGGTTGGTTAAGATTAAATTTTGTAACGAGCA
GTCTCTTTATCTTTCTGGGAAAAATGGTTCGTTATGTTGCGTTATTGTTTTTGAGTACACCATTCTTATTATAA

Upstream 100 bases:

>100_bases
GTATCGTATTTGAAGATGCGGATTTAGGCGTGCAAGCAGGATTAAGTGCGGGAATGGATGTGTTTGATGTTCGCACACGA
GAAATTATTTCGCCAAGATA

Downstream 100 bases:

>100_bases
AATGCGCAAGAAAAAGCCCCACAATAAACGTGGGGCAAATAACCTAAGGAACCAATTTTATTAAAACAACTGCAAGTTGC
TTACACTATAAGACTAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDIFSFFSADFWQANSLCFMFISAFLSATVLPGNSEVIFVALAVPKLMLGSLFNVDILALILIATAGNSLGSLTTYGIGR
WMPKFDPKNYRTLWAINQLRRYGAIALLLSWLPVVGDLFCAIAGWLRLNFVTSSLFIFLGKMVRYVALLFLSTPFLL

Sequences:

>Translated_157_residues
MDIFSFFSADFWQANSLCFMFISAFLSATVLPGNSEVIFVALAVPKLMLGSLFNVDILALILIATAGNSLGSLTTYGIGR
WMPKFDPKNYRTLWAINQLRRYGAIALLLSWLPVVGDLFCAIAGWLRLNFVTSSLFIFLGKMVRYVALLFLSTPFLL
>Mature_157_residues
MDIFSFFSADFWQANSLCFMFISAFLSATVLPGNSEVIFVALAVPKLMLGSLFNVDILALILIATAGNSLGSLTTYGIGR
WMPKFDPKNYRTLWAINQLRRYGAIALLLSWLPVVGDLFCAIAGWLRLNFVTSSLFIFLGKMVRYVALLFLSTPFLL

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA

Homologues:

Organism=Escherichia coli, GI1789045, Length=136, Percent_Identity=46.3235294117647, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y489_HAEIN (P44005)

Other databases:

- EMBL:   L42023
- PIR:   E64008
- RefSeq:   NP_438650.1
- GeneID:   949626
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0489
- NMPDR:   fig|71421.1.peg.463
- TIGR:   HI_0489
- HOGENOM:   HBG662600
- OMA:   MFISAFL
- ProtClustDB:   CLSK808414
- BioCyc:   HINF71421:HI_0489-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 17492; Mature: 17492

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbd7d798)-; HASH(0xbafa5a0)-; HASH(0xc3ce37c)-; HASH(0xc43429c)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSFFSADFWQANSLCFMFISAFLSATVLPGNSEVIFVALAVPKLMLGSLFNVDILAL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHH
ILIATAGNSLGSLTTYGIGRWMPKFDPKNYRTLWAINQLRRYGAIALLLSWLPVVGDLFC
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAGWLRLNFVTSSLFIFLGKMVRYVALLFLSTPFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MDIFSFFSADFWQANSLCFMFISAFLSATVLPGNSEVIFVALAVPKLMLGSLFNVDILAL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHH
ILIATAGNSLGSLTTYGIGRWMPKFDPKNYRTLWAINQLRRYGAIALLLSWLPVVGDLFC
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAGWLRLNFVTSSLFIFLGKMVRYVALLFLSTPFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800