Click here to switch to the map view.

The map label for this gene is 16272363

Identifier: 16272363

GI number: 16272363

Start: 437224

End: 437436

Strand: Direct

Name: 16272363

Synonym: HI0414

Alternate gene names: NA

Gene position: 437224-437436 (Clockwise)

Preceding gene: 30995373

Following gene: 16272364

Centisome position: 23.89

GC content: 41.31

Gene sequence:

>213_bases
ATGCCAATAGGCGGAGATGTGAAGGCGGATCAGGAAACATCAGGTTCTAGAAGCATAAAACGCATTGGCTTTGGTTTTAT
TGGTGGTATTGGCTATGACATTACACCGAATATTACCTTAGACTTAGGTTATCGTTATAACGATTGGGGACGTTTAGAAA
ACGTGCGTTTTAAAACTCATGAAGCCTCTTTCGGAGTGCGTTACCGCTTTTAA

Upstream 100 bases:

>100_bases
TTTTTACTTATATTATAGAACAGAGTAAGTTGGGCATGTTGCTACCAGCGGTTACACAAAAGATGAATTTACAACAAAAC
TTACATTTAAGACTAACAAT

Downstream 100 bases:

>100_bases
TTAAACAAATTTAGTTTTCTATTTAAGCGGTCAAATTCTTCTCATTATTTGCAAAATGAGGGAAAAATTTGACCGCTTGT
TTTTTCTTGAAAAGAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MPIGGDVKADQETSGSRSIKRIGFGFIGGIGYDITPNITLDLGYRYNDWGRLENVRFKTHEASFGVRYRF

Sequences:

>Translated_70_residues
MPIGGDVKADQETSGSRSIKRIGFGFIGGIGYDITPNITLDLGYRYNDWGRLENVRFKTHEASFGVRYRF
>Mature_69_residues
PIGGDVKADQETSGSRSIKRIGFGFIGGIGYDITPNITLDLGYRYNDWGRLENVRFKTHEASFGVRYRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y414_HAEIN (Q57392)

Other databases:

- EMBL:   L42023
- PIR:   F64066
- RefSeq:   NP_438576.1
- ProteinModelPortal:   Q57392
- SMR:   Q57392
- GeneID:   949402
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0414
- NMPDR:   fig|71421.1.peg.389
- TIGR:   HI_0414
- HOGENOM:   HBG095888
- OMA:   YDITPNI
- ProtClustDB:   CLSK378184
- BioCyc:   HINF71421:HI_0414-MONOMER
- InterPro:   IPR011250
- InterPro:   IPR003394
- Gene3D:   G3DSA:2.40.160.20

Pfam domain/function: PF02462 Opacity

EC number: NA

Molecular weight: Translated: 7918; Mature: 7787

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIGGDVKADQETSGSRSIKRIGFGFIGGIGYDITPNITLDLGYRYNDWGRLENVRFKTH
CCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCEEEEECCEECCCCCCCCEEEEEC
EASFGVRYRF
CCCCEEEEEC
>Mature Secondary Structure 
PIGGDVKADQETSGSRSIKRIGFGFIGGIGYDITPNITLDLGYRYNDWGRLENVRFKTH
CCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCEEEEECCEECCCCCCCCEEEEEC
EASFGVRYRF
CCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800