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The map label for this gene is slp [C]

Identifier: 16272337

GI number: 16272337

Start: 409670

End: 410221

Strand: Direct

Name: slp [C]

Synonym: HI0389

Alternate gene names: 16272337

Gene position: 409670-410221 (Clockwise)

Preceding gene: 16272336

Following gene: 16272338

Centisome position: 22.38

GC content: 36.59

Gene sequence:

>552_bases
ATGAAAGGAAAAATCACCTTATTTTTTACCGCACTTTGTTTCGGATTAACGGGCTGTATTGCACCACCAAAAGGGTTAGA
AAAAGAGCGATTCTCAATTAATTCCTATCGCGAGATTTCCCCTCAGGATTTGACCTGTCATTGTAAAACAGTTCGACTTG
GAGGAAAAATTGTCAATACTACCGTTTTAGCAAATCAAACAAAAATTGAAGTGTTAAGTTTACCCGTATCATCAATTTCA
GCTAAACCATTTGTTGAATTGCAATCCGATGGTCGCTTTATCGTGTATTTCAACGGTTTTGTTGAGCCTGAAAATTTAAA
AGAACGTTATATTACTGTAGGTGGTCAATTAGCTGGAACAGAGAAAGGCAAAATAGAACAAGCTGATTATACTTATCCTG
TTGTTCAAGCGGATAAATACCGTATTTGGACACTCAGTACCACCTATGATTATCCAACAGATGATTGGGATGAAGACGAT
GATTGGGGATTTTTTAGATGGAGACATCGCCTTTGGTATGTTCAGCCTGAAATTCACTATTATTTGAATTAA

Upstream 100 bases:

>100_bases
AATTTCAGCTTTAGAAATTGAACCGATTTATTTGCGCAACGAAGTTACTTGGAAAAAATTACCAGGGCGTGAATAAGTTT
AAATAACTGGAGGATAGAAA

Downstream 100 bases:

>100_bases
ATGATAAAATCTTAAAGATTTTCCAACAAATTAGGATAAAAAATGGAAAAAATTTGGTTTCAAAATTATCCAAAAGGTTC
TGAAAAATTTCTAGATACCT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNTTVLANQTKIEVLSLPVSSIS
AKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGTEKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDD
DWGFFRWRHRLWYVQPEIHYYLN

Sequences:

>Translated_183_residues
MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNTTVLANQTKIEVLSLPVSSIS
AKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGTEKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDD
DWGFFRWRHRLWYVQPEIHYYLN
>Mature_183_residues
MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNTTVLANQTKIEVLSLPVSSIS
AKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGTEKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDD
DWGFFRWRHRLWYVQPEIHYYLN

Specific function: The Induction Of Slp May Help To Stabilize The Outer Membrane During Carbon Starvation And Stationary Phase. [C]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=191, Percent_Identity=24.6073298429319, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788108, Length=144, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y389_HAEIN (P43991)

Other databases:

- EMBL:   L42023
- PIR:   I64006
- RefSeq:   NP_438550.1
- GeneID:   949490
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0389
- NMPDR:   fig|71421.1.peg.363
- TIGR:   HI_0389
- HOGENOM:   HBG495065
- OMA:   KERFSIN
- ProtClustDB:   CLSK870211
- BioCyc:   HINF71421:HI_0389-MONOMER
- InterPro:   IPR004658
- TIGRFAMs:   TIGR00752

Pfam domain/function: PF03843 Slp

EC number: NA

Molecular weight: Translated: 21170; Mature: 21170

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc6e96b8)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNT
CCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEECCEEEEE
TVLANQTKIEVLSLPVSSISAKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGT
EEEECCCEEEEEECCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCEEECC
EKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDDDWGFFRWRHRLWYVQPEIHY
CCCCEECCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCEEEE
YLN
EEH
>Mature Secondary Structure
MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNT
CCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEECCEEEEE
TVLANQTKIEVLSLPVSSISAKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGT
EEEECCCEEEEEECCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCEEECC
EKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDDDWGFFRWRHRLWYVQPEIHY
CCCCEECCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCEEEE
YLN
EEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800