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The map label for this gene is afuB

Identifier: 16272097

GI number: 16272097

Start: 143193

End: 145091

Strand: Reverse

Name: afuB

Synonym: HI0129

Alternate gene names: 16272097

Gene position: 145091-143193 (Counterclockwise)

Preceding gene: 16272098

Following gene: 16272096

Centisome position: 7.93

GC content: 40.07

Gene sequence:

>1899_bases
ATGGGCTGGGCTTCTTTCAATTTAACTTGGGCTTGGTTCCTGCCTGTAATTGTGTATGGTGCTTTGCCGTTATTGAGATT
GCCACAGCAAACCCAAGCAAAAACAGAGCTATTTTTGACCGCACTTTCTGTACTGTTTATGTTTATCAGTGCGACGGTGT
ACAAAATTAGTATGGGCTATTCTGTGATTGTGTTACTTGTGGGATATACCGCATTGGCGACACTTTCATTGGCAAAACTA
AAAGTGATGCAAGGTGATAAATTTATCATCGCTTCTTTGCTTTGCATTATCTTGCTCATTTTCTTCTTTATCGTTTATCC
AACATTGGCGATTTTCGTTTCAATGTTTTATGACGGCGATACCTTTGCGCCACAACAAGTGATGCGAATTTTAACGCAGA
GCTATATTGTCCGCGTAATTACCAATTCGCTTTTCTTATCGGGCTTTGTGGGCATCGTTTCTACTGTATTTGGTTTAGCC
TTTGCGCTCTATACCACGCGTATCGCTCGTAGAACGGCATTTATCGGAAAAATTTTCTCTATTTTGCCAATTGTGACGCC
CCCATTTGTTGTAGGACTTGGGGTTACTTTAATGCTCGGACGTTCTGGTTATGTAACCGAATTTTTAAGTACGAATTTTG
GTTTTTCTAGTCATAATTGGCTTTATGGTTTTAATGGGATTGCGATTGCTCAAATTCTCGCATTTGCTCCTATTTCTTTT
ATGATTTTAGATGGCGCATTAAAATCCGTACACCCGTCTATTGAAGAAGCGTCTTATACGTTGCGTGCTAATCGTTATCA
AACGTTCTATCAGATTATTTTTCCGTTACTGCGTCCAGCATTAGCAAATTCTTTCTTAATTGTATTCATTCAATCATTGG
CGGACTTTAGTAATCCTTTAGTGTTAGGTGGAAGTTTCGATGTGATTGCCACACAAATTTATTTCTATATTGCGGGTTCA
CAACTTGATTATGCTTCAGCCAGTACTTTGGGTTCGATGTTGTTAATTTTCTCGTTGGCGATTTTTATCATTCAATACAT
TTGGATTGGTAACCGCTCTTATGTCACTGTTTCGGGGAAATCTTATCGTGGCGATGTGCAAGAGCTGCCAAATGGCTTGA
AATATACCATCATCGGTATGCTTGGCTTCTGGGTAATCTTTAATATGGCACTTTACGGTAGTATTTTCTACGGAAGTTTC
ACTGTAAACTGGGGCGTAAATTACACTTTAACCTTGAAAAACTATGCCATGTTATTCGGGCAAGGATTGAGCGATGGAGC
GTGGCCGTCACTAATCAATACCTTAATCTATGCGGGTATTGCTGCGCCATTAACTGCATTCTTTGGATTATTGATTGCGT
ATATTGTGGTGCGTAAAGATTTCCAAGGTAAAAAATCCCTTGAGTTCTTAACTATGCTTTGTTTTGCCGTGCCAGGTACT
GTGGCTGGGGTGTCTTACATTTTAGCCTTCAACAATGCACCGCTTTATATTACGGGTACGGGCATTATCGTGATTATTTC
AATGGTAATGCGTGATTTACCCATTGGTATGCGAGCAGCGATTGCTGGGTTAGGACAGCTTGATAAATCCCTTGATGAAG
CATCGCTTTCTTTAAAAGGGAGTTCGTGGAAAACATTGTGCTTTATCGTATTGCCATTATTAAAACCTGCGTTGCTTTCT
GCTTTAGTGACTAGTTTCGTTCGTGCAATGACGACGGTAAGTGCGATTATATTCTTAGTGACAGCAGACACTCGCGTCTA
CCGCATATATTTTAAATCGTGTGGAAGACGGAGAATACGGCATTGCGATTGCATACGGTTCTATTTTAATTGTTGTGATG
ATGGCAATTATTTTGTTTTTCGACTGGATTGTAGGCGATACGCGTATTTCCCGTTCTAA

Upstream 100 bases:

>100_bases
TTTTTGGATTATTTTATCCTTGTTAGCGTTTGCACTTCTGCCTTCCAATGCACTTGATTACGGTTTGTTTGAAAGTACTT
CAGATGAATATTTAGAGGCA

Downstream 100 bases:

>100_bases
AGCGAAAAAAATGAATTAACTCGTTAAGTTGTAGGTAAAAATTATGAGTAATAATGATTTCTTAGTATTAAAAAATATCA
CAAAAGCATTTGGTAAAGCG

Product: ferric transport system permease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MGWASFNLTWAWFLPVIVYGALPLLRLPQQTQAKTELFLTALSVLFMFISATVYKISMGYSVIVLLVGYTALATLSLAKL
KVMQGDKFIIASLLCIILLIFFFIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFLSGFVGIVSTVFGLA
FALYTTRIARRTAFIGKIFSILPIVTPPFVVGLGVTLMLGRSGYVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISF
MILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGS
QLDYASASTLGSMLLIFSLAIFIIQYIWIGNRSYVTVSGKSYRGDVQELPNGLKYTIIGMLGFWVIFNMALYGSIFYGSF
TVNWGVNYTLTLKNYAMLFGQGLSDGAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGT
VAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLS
ALVTSFVRAMTTVSAIIFLVTADTRVYRIYFKSCGRRRIRHCDCIRFYFNCCDDGNYFVFRLDCRRYAYFPF

Sequences:

>Translated_632_residues
MGWASFNLTWAWFLPVIVYGALPLLRLPQQTQAKTELFLTALSVLFMFISATVYKISMGYSVIVLLVGYTALATLSLAKL
KVMQGDKFIIASLLCIILLIFFFIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFLSGFVGIVSTVFGLA
FALYTTRIARRTAFIGKIFSILPIVTPPFVVGLGVTLMLGRSGYVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISF
MILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGS
QLDYASASTLGSMLLIFSLAIFIIQYIWIGNRSYVTVSGKSYRGDVQELPNGLKYTIIGMLGFWVIFNMALYGSIFYGSF
TVNWGVNYTLTLKNYAMLFGQGLSDGAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGT
VAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLS
ALVTSFVRAMTTVSAIIFLVTADTRVYRIYFKSCGRRRIRHCDCIRFYFNCCDDGNYFVFRLDCRRYAYFPF
>Mature_631_residues
GWASFNLTWAWFLPVIVYGALPLLRLPQQTQAKTELFLTALSVLFMFISATVYKISMGYSVIVLLVGYTALATLSLAKLK
VMQGDKFIIASLLCIILLIFFFIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFLSGFVGIVSTVFGLAF
ALYTTRIARRTAFIGKIFSILPIVTPPFVVGLGVTLMLGRSGYVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISFM
ILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQ
LDYASASTLGSMLLIFSLAIFIIQYIWIGNRSYVTVSGKSYRGDVQELPNGLKYTIIGMLGFWVIFNMALYGSIFYGSFT
VNWGVNYTLTLKNYAMLFGQGLSDGAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGTV
AGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSA
LVTSFVRAMTTVSAIIFLVTADTRVYRIYFKSCGRRRIRHCDCIRFYFNCCDDGNYFVFRLDCRRYAYFPF

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains

Homologues:

Organism=Escherichia coli, GI1788764, Length=156, Percent_Identity=31.4102564102564, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FBPB1_HAEIN (Q57341)

Other databases:

- EMBL:   L42023
- PIR:   H64049
- RefSeq:   NP_438299.1
- ProteinModelPortal:   Q57341
- SMR:   Q57341
- GeneID:   951037
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0129
- NMPDR:   fig|71421.1.peg.121
- TIGR:   HI_0129
- HOGENOM:   HBG296636
- OMA:   SKAKKMN
- ProtClustDB:   CLSK869723
- BioCyc:   HINF71421:HI_0129-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 70264; Mature: 70133

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc242c40)-; HASH(0xb0b44f8)-; HASH(0xafa8c88)-; HASH(0x405b6d00)-; HASH(0xb694d68)-; HASH(0xc54a3dc)-; HASH(0xbbe0c18)-; HASH(0xc54d13c)-; HASH(0xb60c800)-; HASH(0xc553374)-; HASH(0xc566a28)-; HASH(0xc5500a8)-; HASH(0xbd6119c)-; HASH(0xc553500)-; HASH(0xb6971dc)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWASFNLTWAWFLPVIVYGALPLLRLPQQTQAKTELFLTALSVLFMFISATVYKISMGY
CCCEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SVIVLLVGYTALATLSLAKLKVMQGDKFIIASLLCIILLIFFFIVYPTLAIFVSMFYDGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFAPQQVMRILTQSYIVRVITNSLFLSGFVGIVSTVFGLAFALYTTRIARRTAFIGKIFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPIVTPPFVVGLGVTLMLGRSGYVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISF
HHHCCCCHHHHHCCHHHEECCCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCHHH
MILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPL
HHHHHHHHHHCCCHHHHHEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLGGSFDVIATQIYFYIAGSQLDYASASTLGSMLLIFSLAIFIIQYIWIGNRSYVTVSGK
EECCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SYRGDVQELPNGLKYTIIGMLGFWVIFNMALYGSIFYGSFTVNWGVNYTLTLKNYAMLFG
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEHHHHHHHC
QGLSDGAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
VAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKG
HHHHHHHEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECC
SSWKTLCFIVLPLLKPALLSALVTSFVRAMTTVSAIIFLVTADTRVYRIYFKSCGRRRIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHCCHHHHH
HCDCIRFYFNCCDDGNYFVFRLDCRRYAYFPF
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH
>Mature Secondary Structure 
GWASFNLTWAWFLPVIVYGALPLLRLPQQTQAKTELFLTALSVLFMFISATVYKISMGY
CCEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SVIVLLVGYTALATLSLAKLKVMQGDKFIIASLLCIILLIFFFIVYPTLAIFVSMFYDGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFAPQQVMRILTQSYIVRVITNSLFLSGFVGIVSTVFGLAFALYTTRIARRTAFIGKIFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPIVTPPFVVGLGVTLMLGRSGYVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISF
HHHCCCCHHHHHCCHHHEECCCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCHHH
MILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPL
HHHHHHHHHHCCCHHHHHEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLGGSFDVIATQIYFYIAGSQLDYASASTLGSMLLIFSLAIFIIQYIWIGNRSYVTVSGK
EECCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SYRGDVQELPNGLKYTIIGMLGFWVIFNMALYGSIFYGSFTVNWGVNYTLTLKNYAMLFG
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEHHHHHHHC
QGLSDGAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
VAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKG
HHHHHHHEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECC
SSWKTLCFIVLPLLKPALLSALVTSFVRAMTTVSAIIFLVTADTRVYRIYFKSCGRRRIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHCCHHHHH
HCDCIRFYFNCCDDGNYFVFRLDCRRYAYFPF
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800