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The map label for this gene is ytfJ [C]

Identifier: 16272020

GI number: 16272020

Start: 47298

End: 47852

Strand: Reverse

Name: ytfJ [C]

Synonym: HI0045

Alternate gene names: 16272020

Gene position: 47852-47298 (Counterclockwise)

Preceding gene: 16272022

Following gene: 16272019

Centisome position: 2.61

GC content: 36.28

Gene sequence:

>555_bases
ATGAAAAAACAAATTCTTGCCTTAGTTTGTGGCGTGATATTTAGTAGTTCAACTTGGGCACACAATTTGCAATTAGAACA
ATCTTTACCATCGGTCAAAGTGAGTGAGTATGGTGAAATTGTGCTTTCTGGAAAAGATACTGTGTTTCAACCTTGGGGTT
CTGCGGAATTAGCGGGTAAAGTGCGTGTTGTTCATCATTTAGCGGGTAGAACGGCTGCAAAAGAGNAAAATCAGTCGATG
ATTGATGTGATAAAAGCATCCCATTTTAATCCTGTAAAATACCAAACAACCACTATTATTAATGCGGATGATGCGATTGT
TGGTACAGGTATGTTTGTAAAAAATGGTGCGAAAAAAGGCAAACAGGAAAATCCACATAGCCAAGTTGTGTTAGATGATA
AAAGTGCGGTAAAAAATGCTTGGGGATTAAATTCTAAAGATAGTGCAATTATCGTGTTAGACAAAACGGGAAAAGTAAAA
TTTGTGAAAGAAGGAAAATTGTCTGATAGCGATATTCAGACTGTTATTTCACTAGTGAATGGATTGACCAAATAA

Upstream 100 bases:

>100_bases
GGTTTTCCTTCTTGATTACATATAATAGGCGCACGAGTATAGCAAAAAGATGTCTTTCGCCAAAGCGTGAAAGTTTTTGA
TAAATTTTTGAGGAAAATGT

Downstream 100 bases:

>100_bases
CGTAATACAAAGTTAAAATCCCTAAGCCTTGTGACTTAGGGATTTCTTAATTCTGATGGCGGAGGAATAGGGATTCGAAC
CCTAGGAGGGCGTAAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKQILALVCGVIFSSSTWAHNLQLEQSLPSVKVSEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEXNQSM
IDVIKASHFNPVKYQTTTIINADDAIVGTGMFVKNGAKKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK

Sequences:

>Translated_184_residues
MKKQILALVCGVIFSSSTWAHNLQLEQSLPSVKVSEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEXNQSM
IDVIKASHFNPVKYQTTTIINADDAIVGTGMFVKNGAKKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK
>Mature_184_residues
MKKQILALVCGVIFSSSTWAHNLQLEQSLPSVKVSEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEXNQSM
IDVIKASHFNPVKYQTTTIINADDAIVGTGMFVKNGAKKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfJ

Homologues:

Organism=Escherichia coli, GI1790662, Length=182, Percent_Identity=40.6593406593407, Blast_Score=156, Evalue=8e-40,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): Y045_HAEIN (P44478)

Other databases:

- EMBL:   L42023
- PIR:   B64141
- RefSeq:   NP_438218.1
- GeneID:   950943
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0045
- NMPDR:   fig|71421.1.peg.44
- TIGR:   HI_0045
- HOGENOM:   HBG296534
- OMA:   QHIAGRS
- ProtClustDB:   CLSK869988
- BioCyc:   HINF71421:HI_0045-MONOMER
- InterPro:   IPR006513
- TIGRFAMs:   TIGR01626

Pfam domain/function: PF09695 YtfJ_HI0045

EC number: NA

Molecular weight: Translated: 19815; Mature: 19815

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQILALVCGVIFSSSTWAHNLQLEQSLPSVKVSEYGEIVLSGKDTVFQPWGSAELAGK
CCHHHHHHHHHHHHCCCCCEECEEHHHCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHH
VRVVHHLAGRTAAKEXNQSMIDVIKASHFNPVKYQTTTIINADDAIVGTGMFVKNGAKKG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCHHEECCCCCC
KQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVKFVKEGKLSDSDIQTVISLVN
CCCCCCCEEEECCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
GLTK
HCCC
>Mature Secondary Structure
MKKQILALVCGVIFSSSTWAHNLQLEQSLPSVKVSEYGEIVLSGKDTVFQPWGSAELAGK
CCHHHHHHHHHHHHCCCCCEECEEHHHCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHH
VRVVHHLAGRTAAKEXNQSMIDVIKASHFNPVKYQTTTIINADDAIVGTGMFVKNGAKKG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCHHEECCCCCC
KQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVKFVKEGKLSDSDIQTVISLVN
CCCCCCCEEEECCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
GLTK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800