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The map label for this gene is yidE [C]

Identifier: 16272010

GI number: 16272010

Start: 36376

End: 38031

Strand: Reverse

Name: yidE [C]

Synonym: HI0035

Alternate gene names: 16272010

Gene position: 38031-36376 (Counterclockwise)

Preceding gene: 16272015

Following gene: 16272009

Centisome position: 2.08

GC content: 41.67

Gene sequence:

>1656_bases
ATGAGTGATATTGCGATCACGATTAGTCTTCTTGCCCTCGTCGCCGTAATCGGCTTATGGATCGGGCATTGGAAGATCCG
CGGGGTTGGGCTTGGCATTGGTGGCGTGCTGTTTGGCGGCATTATTGTTGCCCATTTCACTAATCAATATGGCTTGAAAC
TGGATGCGCATACGCTGCATTTTGTGCAAGAATTTGGTTTGATTTTATTTGTTTATACTATTGGTATTCAGGTTGGACCT
GGCTTTTTTTCTTCTTTACGAAAATCTGGTTTAAAGCTAAATGCCTTTGCCATTTTGATTATTCTGCTGGGGTCAATTGC
CGTGGTTCTTGTACATAAAATTGCGGATGTTCCACTGGATATTGCCTTAGGTATTTATTCTGGTGCTGTTACTAATACGC
CTGCGTTGGGGGCAGGGCAGCAAATTTTAGCAGAATTAGGGGTGCCTCAAACCACTGTAACTATGGGGGTGTCTTATGCA
ATGGCTTATCCATTCGGGATTTGCGGTATTTTGCTTGCAATGTGGTTAATCCGCTTGTTTTTTAACGTCAAAGTGGACGA
TGAAGCTGCTCGTTTTAATGCGGAGAGCAGCCAAGATAAAGAAAGTTTACATAATATTTCTTTAAAAGTGACGAACCAAA
ATCTAGATGGTCTGACGTTAATTCAAATTCCGGGATTTAGCGATGAAGAAGTCGTATGTTCACGTTTAAAACGCGATGAT
ATGGAAATTGTTCCAAAGGCAAGTACTGAGATTCGTACCAACGATATTTTACAATTAGTGGGTGATGATAATTCGCTTGC
TAAAATGCGTTTAATTATCGGACACGAAGTTGATGCACCAACCGTTGCCTATAGTGGCGAAATTCGTTCCGAGCGTGTGG
TGGTAACGAATGAAAAAGTATTAGGCAAAAAGATCCGTGCGTTAGGCATTCATCAAAAATATGGGGTTGTAATTTCACGT
TTAAATCGTGCAGGGATTGAGTTAGTTCCAACGGGAAATACCACACTGCAATTTGGCGATGTGCTACATATGGTTGGACG
CAGTGATGTACTAAATCAGGCCATTTCAGTTATTGGTAACGCACAACAGAAATTACTTCAAGTGCAAATGTTACCAGTGT
TTATCGGTATTGGTTTAGGGGTACTCGTTGGTTCGATTCCATTCTATATTCCAGGTTTCCCTGTTGCGTTAAAATTAGGG
CTTGCTGGCGGGCCATTGGTGGTTGCGTTGATTTTAGCGAGAATTGGCACGATTGGTAAACTTTACTGGTTTATGCCACC
AAGTGCTAACTTGGCATTGCGCGAAATTGGGATTGTCCTTTTCTTGGCGGTTGTTGGTTTAAAATCAGGTGGAAGTTTCT
TTGATACTTTAGTGAATGGTTCGGGACTTGAATGGATGGGATACGGTATTTTTATCACTTTTGTGCCGTTGATTATTGTT
GGGACTATAGCACGCTTATATGGAAAACTTAATTACCTCACAATATGCGGTTTACTTGCAGGTTCAATGACGGATCCTCC
CGCTTTAGCATTTGCGAATGAAATTAAAGAAGATAACGGTGCTGCAGCACTTTCTTATGCAACTGTGTATCCATTGGTGA
TGTTCTTGCGAATAATGTCGCCACAGTTATTGGCAGTGTTATTATGGGCAGCATAG

Upstream 100 bases:

>100_bases
AAATGTGACGAACGTATCATTTTTTGAGTTTGGTTAAGGTTTTCAAAAAACAACTTGGATATAATCCGAAGGAGTTAAAT
TTCATTTTTAAGGGGTCAAT

Downstream 100 bases:

>100_bases
TAAAAATAATTTCAATTTAGACATAAAAAGCGCGGTTAATTTCGCGCTTATTTTTTGCGTGGATTTTGCGCAAGAGGGTA
TTCAATGATAGAATTCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSDIAITISLLALVAVIGLWIGHWKIRGVGLGIGGVLFGGIIVAHFTNQYGLKLDAHTLHFVQEFGLILFVYTIGIQVGP
GFFSSLRKSGLKLNAFAILIILLGSIAVVLVHKIADVPLDIALGIYSGAVTNTPALGAGQQILAELGVPQTTVTMGVSYA
MAYPFGICGILLAMWLIRLFFNVKVDDEAARFNAESSQDKESLHNISLKVTNQNLDGLTLIQIPGFSDEEVVCSRLKRDD
MEIVPKASTEIRTNDILQLVGDDNSLAKMRLIIGHEVDAPTVAYSGEIRSERVVVTNEKVLGKKIRALGIHQKYGVVISR
LNRAGIELVPTGNTTLQFGDVLHMVGRSDVLNQAISVIGNAQQKLLQVQMLPVFIGIGLGVLVGSIPFYIPGFPVALKLG
LAGGPLVVALILARIGTIGKLYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGSGLEWMGYGIFITFVPLIIV
GTIARLYGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAALSYATVYPLVMFLRIMSPQLLAVLLWAA

Sequences:

>Translated_551_residues
MSDIAITISLLALVAVIGLWIGHWKIRGVGLGIGGVLFGGIIVAHFTNQYGLKLDAHTLHFVQEFGLILFVYTIGIQVGP
GFFSSLRKSGLKLNAFAILIILLGSIAVVLVHKIADVPLDIALGIYSGAVTNTPALGAGQQILAELGVPQTTVTMGVSYA
MAYPFGICGILLAMWLIRLFFNVKVDDEAARFNAESSQDKESLHNISLKVTNQNLDGLTLIQIPGFSDEEVVCSRLKRDD
MEIVPKASTEIRTNDILQLVGDDNSLAKMRLIIGHEVDAPTVAYSGEIRSERVVVTNEKVLGKKIRALGIHQKYGVVISR
LNRAGIELVPTGNTTLQFGDVLHMVGRSDVLNQAISVIGNAQQKLLQVQMLPVFIGIGLGVLVGSIPFYIPGFPVALKLG
LAGGPLVVALILARIGTIGKLYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGSGLEWMGYGIFITFVPLIIV
GTIARLYGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAALSYATVYPLVMFLRIMSPQLLAVLLWAA
>Mature_550_residues
SDIAITISLLALVAVIGLWIGHWKIRGVGLGIGGVLFGGIIVAHFTNQYGLKLDAHTLHFVQEFGLILFVYTIGIQVGPG
FFSSLRKSGLKLNAFAILIILLGSIAVVLVHKIADVPLDIALGIYSGAVTNTPALGAGQQILAELGVPQTTVTMGVSYAM
AYPFGICGILLAMWLIRLFFNVKVDDEAARFNAESSQDKESLHNISLKVTNQNLDGLTLIQIPGFSDEEVVCSRLKRDDM
EIVPKASTEIRTNDILQLVGDDNSLAKMRLIIGHEVDAPTVAYSGEIRSERVVVTNEKVLGKKIRALGIHQKYGVVISRL
NRAGIELVPTGNTTLQFGDVLHMVGRSDVLNQAISVIGNAQQKLLQVQMLPVFIGIGLGVLVGSIPFYIPGFPVALKLGL
AGGPLVVALILARIGTIGKLYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGSGLEWMGYGIFITFVPLIIVG
TIARLYGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAALSYATVYPLVMFLRIMSPQLLAVLLWAA

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=551, Percent_Identity=63.5208711433757, Blast_Score=692, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=562, Percent_Identity=22.5978647686833, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y035_HAEIN (P44472)

Other databases:

- EMBL:   L42023
- PIR:   I64140
- RefSeq:   NP_438208.1
- ProteinModelPortal:   P44472
- GeneID:   950933
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0035
- NMPDR:   fig|71421.1.peg.34
- TIGR:   HI_0035
- HOGENOM:   HBG452396
- OMA:   RIMSPQL
- ProtClustDB:   PRK03818
- BioCyc:   HINF71421:HI_0035-MONOMER
- HAMAP:   MF_01016
- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 59015; Mature: 58884

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb4833f4)-; HASH(0xae758cc)-; HASH(0xb19f33c)-; HASH(0xb1a04b8)-; HASH(0xb0b0838)-; HASH(0xb19f8e8)-; HASH(0xb19fc9c)-; HASH(0xb4eb76c)-; HASH(0xb4dd34c)-; HASH(0xb19f1b0)-; HASH(0xb19dcec)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIAITISLLALVAVIGLWIGHWKIRGVGLGIGGVLFGGIIVAHFTNQYGLKLDAHTLH
CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEECHHHHH
FVQEFGLILFVYTIGIQVGPGFFSSLRKSGLKLNAFAILIILLGSIAVVLVHKIADVPLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IALGIYSGAVTNTPALGAGQQILAELGVPQTTVTMGVSYAMAYPFGICGILLAMWLIRLF
HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNVKVDDEAARFNAESSQDKESLHNISLKVTNQNLDGLTLIQIPGFSDEEVVCSRLKRDD
HCCCCCCHHHHCCCCCCHHHHHHHEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCC
MEIVPKASTEIRTNDILQLVGDDNSLAKMRLIIGHEVDAPTVAYSGEIRSERVVVTNEKV
CCCCCCCCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEEECCHH
LGKKIRALGIHQKYGVVISRLNRAGIELVPTGNTTLQFGDVLHMVGRSDVLNQAISVIGN
HHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHHHHH
AQQKLLQVQMLPVFIGIGLGVLVGSIPFYIPGFPVALKLGLAGGPLVVALILARIGTIGK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCE
LYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGSGLEWMGYGIFITFVPLIIV
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GTIARLYGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAALSYATVYPLVMFLRIMS
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHC
PQLLAVLLWAA
HHHHHHHHHCH
>Mature Secondary Structure 
SDIAITISLLALVAVIGLWIGHWKIRGVGLGIGGVLFGGIIVAHFTNQYGLKLDAHTLH
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEECHHHHH
FVQEFGLILFVYTIGIQVGPGFFSSLRKSGLKLNAFAILIILLGSIAVVLVHKIADVPLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IALGIYSGAVTNTPALGAGQQILAELGVPQTTVTMGVSYAMAYPFGICGILLAMWLIRLF
HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNVKVDDEAARFNAESSQDKESLHNISLKVTNQNLDGLTLIQIPGFSDEEVVCSRLKRDD
HCCCCCCHHHHCCCCCCHHHHHHHEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCC
MEIVPKASTEIRTNDILQLVGDDNSLAKMRLIIGHEVDAPTVAYSGEIRSERVVVTNEKV
CCCCCCCCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEEECCHH
LGKKIRALGIHQKYGVVISRLNRAGIELVPTGNTTLQFGDVLHMVGRSDVLNQAISVIGN
HHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHHHHH
AQQKLLQVQMLPVFIGIGLGVLVGSIPFYIPGFPVALKLGLAGGPLVVALILARIGTIGK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCE
LYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGSGLEWMGYGIFITFVPLIIV
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GTIARLYGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAALSYATVYPLVMFLRIMS
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHC
PQLLAVLLWAA
HHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800