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The map label for this gene is rsmC [H]

Identifier: 16271987

GI number: 16271987

Start: 12367

End: 13359

Strand: Direct

Name: rsmC [H]

Synonym: HI0012

Alternate gene names: 16271987

Gene position: 12367-13359 (Clockwise)

Preceding gene: 16271984

Following gene: 16271993

Centisome position: 0.68

GC content: 36.56

Gene sequence:

>993_bases
GTGATTTCTCTAGAAAGCCAAGTTTTAGAACGCCATATTTCATTTTTTGATGGTAAATCGGTATTATTTGCTGGCGGTAT
TTCTGATAGTTTTCCTCAAACATTAGCCTCAAAATGCTCATCAATCCAAATTTGGAGTTGCTATTTTGACTATGCAAGAA
CACAAAGTGCGGTCAATTTTTCCGTTGAATTTCAAGGTCAAGCGGATTTAATCGTTTATTATTGGACTAAAAACAAACAA
GAAGTCAATTTCCAACTGATTCAACTATTAGCTCAAGCATCTATTGGTCAAGAAATATTAATTATTGGTGAAAACCGTTG
TGGCGTGCGTTCAGTAGAAAAAACATTATCACCCTATGGAGAAATAGCAAAAATTGACTCTGCTCGTCGTTGCGGTTTAT
ATCATTTTTCACTCCAAAATAAACCGCACTTTGAACTTAAAAATTTCTGGAGAACCTACCAACATTCAACACTTGAAAAC
TTAACTATATATAGTTTACCTGGGGTATTTAGTGCGGCGGAATTAGACACAGGCACAGAACTGTTACTTTCAACTATTGA
TAATAAAATAAAAGGAAAAGTGCTTGATCTTGGCTGTGGGGCGGGGGTAATTGGCTCTATGATAAAAAAACGCACGCCTA
ACGCACAAATTACAATGACAGATATTCACGCAATGGCATTAGAATCAGCGCGTAAAACACTTTCTGAAAATCAATTACAA
GGCGAGGTTTACGCCAGTGATGTCTTTTCTGATATAGAAGGAAAATTTGATTTGATCATTTCTAATCCTCCATTCCACGA
TGGCATTGATACCGCCTATCGAGCAGTGACAGAACTCATCACTCAAGCGAAATGGCATCTCAATCAAGGTGGAGAATTAC
GCATTGTCGCCAATTCATTTCTGCCTTATCCCGAATTACTTAGACAACATTTCAATGATTATCAAGTTCTTGCTCAAACA
GGAAAATTTAAAGTGTATTCAGTGAAAAATTAG

Upstream 100 bases:

>100_bases
AATTTTTAAAAACGTTGCTTGAAAAATAGTGTTAATTTCTTTTATTAATCTTTGCTAAAATGGTGCGTAATTTTAACCAA
TAACCCACAGGATTCAAAGC

Downstream 100 bases:

>100_bases
AAACAAAAAAATCCCCATCACAATAATGGGGATTTTTATTATGCGTATAAATTTTACCGCATTTTATTCATCCATATATC
CTAAACTACGCAGCGCACGT

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MISLESQVLERHISFFDGKSVLFAGGISDSFPQTLASKCSSIQIWSCYFDYARTQSAVNFSVEFQGQADLIVYYWTKNKQ
EVNFQLIQLLAQASIGQEILIIGENRCGVRSVEKTLSPYGEIAKIDSARRCGLYHFSLQNKPHFELKNFWRTYQHSTLEN
LTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRTPNAQITMTDIHAMALESARKTLSENQLQ
GEVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKWHLNQGGELRIVANSFLPYPELLRQHFNDYQVLAQT
GKFKVYSVKN

Sequences:

>Translated_330_residues
MISLESQVLERHISFFDGKSVLFAGGISDSFPQTLASKCSSIQIWSCYFDYARTQSAVNFSVEFQGQADLIVYYWTKNKQ
EVNFQLIQLLAQASIGQEILIIGENRCGVRSVEKTLSPYGEIAKIDSARRCGLYHFSLQNKPHFELKNFWRTYQHSTLEN
LTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRTPNAQITMTDIHAMALESARKTLSENQLQ
GEVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKWHLNQGGELRIVANSFLPYPELLRQHFNDYQVLAQT
GKFKVYSVKN
>Mature_330_residues
MISLESQVLERHISFFDGKSVLFAGGISDSFPQTLASKCSSIQIWSCYFDYARTQSAVNFSVEFQGQADLIVYYWTKNKQ
EVNFQLIQLLAQASIGQEILIIGENRCGVRSVEKTLSPYGEIAKIDSARRCGLYHFSLQNKPHFELKNFWRTYQHSTLEN
LTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRTPNAQITMTDIHAMALESARKTLSENQLQ
GEVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKWHLNQGGELRIVANSFLPYPELLRQHFNDYQVLAQT
GKFKVYSVKN

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=328, Percent_Identity=46.3414634146341, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI87082206, Length=169, Percent_Identity=31.3609467455621, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37062; Mature: 37062

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLESQVLERHISFFDGKSVLFAGGISDSFPQTLASKCSSIQIWSCYFDYARTQSAVNF
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCEEEE
SVEFQGQADLIVYYWTKNKQEVNFQLIQLLAQASIGQEILIIGENRCGVRSVEKTLSPYG
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCH
EIAKIDSARRCGLYHFSLQNKPHFELKNFWRTYQHSTLENLTIYSLPGVFSAAELDTGTE
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCEEEEECCCCCCHHHCCCHHH
LLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRTPNAQITMTDIHAMALESARKTLSENQLQ
HHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
GEVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKWHLNQGGELRIVANSF
CHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
LPYPELLRQHFNDYQVLAQTGKFKVYSVKN
CCCHHHHHHHCCCCEEHHHCCCEEEEEECC
>Mature Secondary Structure
MISLESQVLERHISFFDGKSVLFAGGISDSFPQTLASKCSSIQIWSCYFDYARTQSAVNF
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCEEEE
SVEFQGQADLIVYYWTKNKQEVNFQLIQLLAQASIGQEILIIGENRCGVRSVEKTLSPYG
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCH
EIAKIDSARRCGLYHFSLQNKPHFELKNFWRTYQHSTLENLTIYSLPGVFSAAELDTGTE
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCEEEEECCCCCCHHHCCCHHH
LLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRTPNAQITMTDIHAMALESARKTLSENQLQ
HHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
GEVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKWHLNQGGELRIVANSF
CHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
LPYPELLRQHFNDYQVLAQTGKFKVYSVKN
CCCHHHHHHHCCCCEEHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA