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The map label for this gene is priB [H]

Identifier: 161350027

GI number: 161350027

Start: 568473

End: 568799

Strand: Reverse

Name: priB [H]

Synonym: HI0546

Alternate gene names: 161350027

Gene position: 568799-568473 (Counterclockwise)

Preceding gene: 16272491

Following gene: 16272489

Centisome position: 31.08

GC content: 35.47

Gene sequence:

>327_bases
ATGCTGAAGAGTAATTTGAAAATTGATAATAGTTTTTCGGTTATGGGAGTCGTTTCTCGGTTACCAAAGCGATTAAAGAG
CCCTAGTGGAATTGAGCATTGCAAGTTTTTGTTAGAACATCGTTCTGATCAGATTGAAAGTGGTTTCACACGTCAAGCTT
GGTTAAAAATGCCTGTTCAAATTAGTGGTAATCAATTGATAGAAAAAACTCAAAGCATTACGGTCGGTAGTAAAATTTTG
GTGGTGGGATTTATTACATCACATAAAACCCAAAGTGGGTTATGCCAATTAGTTTTACATGCCGAGCAAATCGAATTTAT
AGATTAG

Upstream 100 bases:

>100_bases
GTTATCCATACTAAGCACGCCGTAACCGAAGCGTCCCCAATGAAAGCGGCTAAAGAAGAACGTAAACCTTTAGCTGAAGT
TGAAAACAACGATTTTGAGG

Downstream 100 bases:

>100_bases
GAGACTAGCCAAATGGCACGTTATTTCCGTCGTCGTAAGTTCTGCCGTTTCACAGCGGAAAATGTTGTTGAAATCGATTA
CAAAGATATCGCTACATTAA

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLKSNLKIDNSFSVMGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKIL
VVGFITSHKTQSGLCQLVLHAEQIEFID

Sequences:

>Translated_108_residues
MLKSNLKIDNSFSVMGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKIL
VVGFITSHKTQSGLCQLVLHAEQIEFID
>Mature_108_residues
MLKSNLKIDNSFSVMGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKIL
VVGFITSHKTQSGLCQLVLHAEQIEFID

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790645, Length=101, Percent_Identity=57.4257425742574, Blast_Score=119, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 12107; Mature: 12107

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSNLKIDNSFSVMGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQ
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCCCHHHHCCCEE
ISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID
ECCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKSNLKIDNSFSVMGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQ
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCCCHHHHCCCEE
ISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID
ECCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA