| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is hslO [H]
Identifier: 99082729
GI number: 99082729
Start: 3057918
End: 3058895
Strand: Direct
Name: hslO [H]
Synonym: TM1040_2889
Alternate gene names: 99082729
Gene position: 3057918-3058895 (Clockwise)
Preceding gene: 99082727
Following gene: 99082730
Centisome position: 95.53
GC content: 58.59
Gene sequence:
>978_bases ATGACACTTGGTTCAAAAATCGCGTGGGACGACACCGTCCTGCCCTTCCAGCTTGATGCATCCGACATGCGTGGCCGCGT GGCGCGGCTGGACGGTGTGTTGGATGGTATCCTGAAACAACACAATTATCCGCAACCGGTCGAGGCACTGGTGGCTGAGA TGGCGCTGCTTACTGCGCTGATCGGTCAGACCATGAGCCTGCGTTGGAAGCTGTCTTTGCAAGTTCAGTCCAAGGGAGCG GTGCGGATGATTGCTACCGATTACTACGCCCCCGAAAAGGAAGGCGAGCCTGCCCGAATTCGCGCCTATGCGAGTTTTGA CGCTGATCGTATCACGGATGGCGCTCCTTTTGCCCAACTGGGCGATGGCTACTTCGCAATCCTGATCGATCAGGGTGGAG GAACGAAGCCCTATCAAGGGATTACGCCGCTGGCGGCAACGTCTTTGTCGGAATGTGCGCAGGCCTATTTTGCGCAGTCC GAACAGCTGCCGACGCGTTTTTCGCTCAGCTTTGGCAAGTCCTCCGAGCCGGGCAAGCCCGAGCACTGGCGCGCAGGTGG CATCATGCTGCAGCATATGCCCAAGGCCTCTCCGTTCGCCGCTGAGGCCAGTGGCACTGGGGATGTCTTGACCGCCTCTG ATCTGGTCTCCGGCGAAGAAGAAGAAAACTGGAATCGCGTCAACATCTTGCTGGAAACGGTCGAAGATCTTGAGCTGATC GGCCCCTCGGTATCGCCCAGCGAGCTGCTTTTGAGGCTGTTCCATGAGGAGCGGCCACGGGTTTATGACGCGCAATCTGT CCGTTTCGGCTGCACATGCTCCGAAGAACGGGTGCGACAGAGCCTGTCGATCTATTCCGCAAAGGATATCGGAACAATGA CCACCGAGGACGGGCGCGTCACCGCGGATTGTCAGTTCTGCGGCGCGCATTACGATCTTGATCCGGCGACGGTTGGTTTC GACGCGGCAGGGGACTGA
Upstream 100 bases:
>100_bases CACCTCTCCAAAACGTCTGATCACCTCTCTCCCCTTCACTCTGATGCTGAAAAGCCTATATAGCGTCGGTATGCCAACAG CCGGCCGTTAAGGAAACCCC
Downstream 100 bases:
>100_bases TCCCGTTGAGCGCGCTTGCGGAGACCATCGCCAAGGCGCTGACACGCGCTCGCACGGAAACGTCGGATTTCGATCTAAAC CCGGAAACCGTGCTGCCTGC
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYPQPVEALVAEMALLTALIGQTMSLRWKLSLQVQSKGA VRMIATDYYAPEKEGEPARIRAYASFDADRITDGAPFAQLGDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQS EQLPTRFSLSFGKSSEPGKPEHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSGEEEENWNRVNILLETVEDLELI GPSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEERVRQSLSIYSAKDIGTMTTEDGRVTADCQFCGAHYDLDPATVGF DAAGD
Sequences:
>Translated_325_residues MTLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYPQPVEALVAEMALLTALIGQTMSLRWKLSLQVQSKGA VRMIATDYYAPEKEGEPARIRAYASFDADRITDGAPFAQLGDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQS EQLPTRFSLSFGKSSEPGKPEHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSGEEEENWNRVNILLETVEDLELI GPSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEERVRQSLSIYSAKDIGTMTTEDGRVTADCQFCGAHYDLDPATVGF DAAGD >Mature_324_residues TLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYPQPVEALVAEMALLTALIGQTMSLRWKLSLQVQSKGAV RMIATDYYAPEKEGEPARIRAYASFDADRITDGAPFAQLGDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQSE QLPTRFSLSFGKSSEPGKPEHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSGEEEENWNRVNILLETVEDLELIG PSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEERVRQSLSIYSAKDIGTMTTEDGRVTADCQFCGAHYDLDPATVGFD AAGD
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=289, Percent_Identity=30.7958477508651, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 35353; Mature: 35222
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYPQPVEALVAEMALLTAL CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGQTMSLRWKLSLQVQSKGAVRMIATDYYAPEKEGEPARIRAYASFDADRITDGAPFAQL HCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHCCCCCCHHHH GDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQSEQLPTRFSLSFGKSSEPGKP CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC EHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSGEEEENWNRVNILLETVEDLELI CCEECCCEEEECCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHH GPSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEERVRQSLSIYSAKDIGTMTTEDGRV CCCCCHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCEE TADCQFCGAHYDLDPATVGFDAAGD EEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYPQPVEALVAEMALLTAL CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGQTMSLRWKLSLQVQSKGAVRMIATDYYAPEKEGEPARIRAYASFDADRITDGAPFAQL HCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHCCCCCCHHHH GDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQSEQLPTRFSLSFGKSSEPGKP CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC EHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSGEEEENWNRVNILLETVEDLELI CCEECCCEEEECCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHH GPSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEERVRQSLSIYSAKDIGTMTTEDGRV CCCCCHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCEE TADCQFCGAHYDLDPATVGFDAAGD EEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA