Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yibF [C]

Identifier: 99082665

GI number: 99082665

Start: 2994033

End: 2994698

Strand: Direct

Name: yibF [C]

Synonym: TM1040_2825

Alternate gene names: 99082665

Gene position: 2994033-2994698 (Clockwise)

Preceding gene: 99082664

Following gene: 99082669

Centisome position: 93.54

GC content: 56.61

Gene sequence:

>666_bases
ATGGCTCGTCTCTATCATGTCCCCCTGTCGCCCTTCTGTCGCAAAGTGCGTCTGTCTCTGGCGGAGAAGAAGATTGAGGT
GGAGCTTGTCGAGGAGCGCTACTGGGAGCAGGATGCGGACTTTTTGCGCCGCAACCCAGCCGCAAAGGTCCCTGTCTTGC
GCCTCGATGGGATTCTCATGGCAGAAAGCGCGGCGATCTGTGAATATATCGAAGAAACTCGCCCAGACCCATCCCTGATG
CCGAAGAAGCCAGCCGAACGGCTGGAAGTGCGCCGTCTGGTGAGCTGGTTTGACGACAAGTTTCACCATGAAGTCACCTC
AAAGCTGCTCTACGAGCGCGTCAACAAAAAGATGACTGGCGAGGGATATCCTGACAGCGGCAACGTGAAATCAGGGGCGA
AGGCGATCAAATACCACATCGATTACCTGTCCTGGCTGCTGGACCACCGCCGCTGGCTTGCAGGGGATTCGATGACGCTT
GCAGATTTTGCCGCCGCAGCACATCTGTCTTCTCTGGACTATATCTCAGATGTGGATTGGAACCGCTCTGCAGTGGTGAA
GGATTGGTACGCGAAAATCAAATCGAGGCCCGCGTTCCGCTCCATTCTGGCCGATCAGGTTCCGGGGTTCCGCCCCCCTT
CGCACTACGCCGATCTGGACTTCTGA

Upstream 100 bases:

>100_bases
CGACGGACGCTCTGCCTGTTTCGAGCATTGAAGTTTCTGCTCCGGCAAGGCATTGCTGGTGCACCACGATATCACAACAC
CCGGAGAACCGAGGACGCCC

Downstream 100 bases:

>100_bases
AACCACGCCGCGCGCGCAATTCATCCTTGATTGATCCACGGGATGAGGGTATCCCCGGCAGCGCTTCGCCTCAATAGCTC
AGCTGGTAGAGCAGGTCCTT

Product: glutathione S-transferase-like

Products: HX; R-S-glutathione

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Protein; Stringent Starvation Protein A; Glutathione Transferase; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase III; Gst-Related Protein; Protein LigF; Transferase; Glutathione S-Transferase With Thioredoxin-Like Domain; Transcription Modulator Protein; Unkown Function; Glutathione S-Transferase Ta Family; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S- Transferase N-Terminal

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRRNPAAKVPVLRLDGILMAESAAICEYIEETRPDPSLM
PKKPAERLEVRRLVSWFDDKFHHEVTSKLLYERVNKKMTGEGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTL
ADFAAAAHLSSLDYISDVDWNRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYADLDF

Sequences:

>Translated_221_residues
MARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRRNPAAKVPVLRLDGILMAESAAICEYIEETRPDPSLM
PKKPAERLEVRRLVSWFDDKFHHEVTSKLLYERVNKKMTGEGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTL
ADFAAAAHLSSLDYISDVDWNRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYADLDF
>Mature_220_residues
ARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRRNPAAKVPVLRLDGILMAESAAICEYIEETRPDPSLMP
KKPAERLEVRRLVSWFDDKFHHEVTSKLLYERVNKKMTGEGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTLA
DFAAAAHLSSLDYISDVDWNRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYADLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22202624, Length=164, Percent_Identity=27.4390243902439, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17556142, Length=189, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17551302, Length=204, Percent_Identity=30.3921568627451, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17510461, Length=156, Percent_Identity=31.4102564102564, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322968, Length=222, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20130123, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.18

Molecular weight: Translated: 25568; Mature: 25437

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRRNPAAKVPVLRLDGILM
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
AESAAICEYIEETRPDPSLMPKKPAERLEVRRLVSWFDDKFHHEVTSKLLYERVNKKMTG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTLADFAAAAHLSSLDYISDVDW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
NRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYADLDF
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRRNPAAKVPVLRLDGILM
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
AESAAICEYIEETRPDPSLMPKKPAERLEVRRLVSWFDDKFHHEVTSKLLYERVNKKMTG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTLADFAAAAHLSSLDYISDVDW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
NRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYADLDF
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: RX; glutathione

Specific reaction: RX + glutathione = HX + R-S-glutathione

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA