| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082603
Identifier: 99082603
GI number: 99082603
Start: 2910088
End: 2910621
Strand: Reverse
Name: 99082603
Synonym: TM1040_2763
Alternate gene names: NA
Gene position: 2910621-2910088 (Counterclockwise)
Preceding gene: 99082605
Following gene: 99082600
Centisome position: 90.93
GC content: 54.87
Gene sequence:
>534_bases ATGTTCTTATCCGCCTTATCTCCGATCCGTCGCGTCACTGCAATCACTCTGCTCGGCCTGAGCGGTCTCTTGATTACATC CTGCCAACGCGAAGCCTCAAGTTCCGAGGCGGCAGCTTTCTTGTCTGGTTGCACCTCGAACCCGGGTCGGAGTGACCACT GTACACCGCTTTTGGCCTGTTTCGAAAATGGGCAAAGCATCCGTGGGGCGACGTTTGGATGGTTGTCGGGCAATATCGAG GGAAAGACCCAAGATGGCGTAGCGTGCCGCGGAAAATGGGAGATTTTAAGTACAGCAGATGCCAGTGGTTCTGCTCAATT TATCTGCGAGGACGGCAGCTATGGAAACGCAAGTTTTTCCTATGATCGCGCGAAGCCCGGCACGATTTGGGGGAGAGGTG AATTAAATGCGTCCGAGGCGTTTCAGGTCTGGGGCGGTTGGGACCTCATTCAGCGGCTGCAATCGGCAGGGGGCCATTTT GATCAGCTATGTGATGCTTTGAATGGCCTGAAAGAGCGCCGATCCGCACTGTGA
Upstream 100 bases:
>100_bases CGCGAAAGATGAAGGCGGAGCCATCGATCAGGTGGAGGTGACAGCCTTTGCCAAAATTGCTAGTGCTCATGGTGTTTGAC CCCAACTGATTGTTTCCCAG
Downstream 100 bases:
>100_bases TATATTGCACGCATGCATCGTTGTGGCCTTCAGGTAGGGTATTGGCCCATCTGTCAGTTCGACAGATTTAGAACATTCCC ATCACAAGGCCTGCTGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF DQLCDALNGLKERRSAL
Sequences:
>Translated_177_residues MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF DQLCDALNGLKERRSAL >Mature_177_residues MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF DQLCDALNGLKERRSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18802; Mature: 18802
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLAC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FENGQSIRGATFGWLSGNIEGKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFS HHCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCC YDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHFDQLCDALNGLKERRSAL CCCCCCCCEECCCCCCHHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLAC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FENGQSIRGATFGWLSGNIEGKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFS HHCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCC YDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHFDQLCDALNGLKERRSAL CCCCCCCCEECCCCCCHHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA