Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99082602

Identifier: 99082602

GI number: 99082602

Start: 2909535

End: 2910020

Strand: Direct

Name: 99082602

Synonym: TM1040_2762

Alternate gene names: NA

Gene position: 2909535-2910020 (Clockwise)

Preceding gene: 99082601

Following gene: 99082604

Centisome position: 90.9

GC content: 63.58

Gene sequence:

>486_bases
ATGGCAGAGCTGTTGATCATATATCATTCCCGCACCGGCGGCAGCCGGCAGATGGCCGAGGCCGCTTATGCGGGCGCTTC
GAGCGAGGGGTCCGCGCGTCTGGTCCACGCCGAGGAGGCCGGGCCGGAGGATTTGCGGGCGGCAAGCGGCTATCTGTTCT
GCGCGCCAGAAAACCTCGCGGCGCTGTCTGGTGCGATGAAGGAGTTCTTTGACCGCTGTTACTATCCCGTTCTGGGTCAG
CTAGAGGGCCGCGCGTATGCGCAGATGATCTGCGCCGGATCGGATGGCGAGAGCGCCGCGCGGCAACTGGCACGGATCGC
TCAGGGCTGGCGGCTGAAGCCGGTGCAGGAACCGCTGATTATCTGCACCCACGCACAGACTCCGGAGGCGATTCTGGCCG
ACAAGGTCATCCCCGAGGAAGAATTGCAGATGTGCCGCGGCTTAGGTCAGGCCATGGCAGCAGGCCTTGTGATGGGAATG
TTCTAA

Upstream 100 bases:

>100_bases
GCGATTGCAAATACATCCACCGGGATTTTGAAGGCAAAGTCGCCTAAGCCAGGCCTGCCTGCGCTTTTGATCCGCACCCG
GGTTCGTTAGTCTGCCGGAC

Downstream 100 bases:

>100_bases
ATCTGTCGAACTGACAGATGGGCCAATACCCTACCTGAAGGCCACAACGATGCATGCGTGCAATATATCACAGTGCGGAT
CGGCGCTCTTTCAGGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Multimeric Flavodoxin WrbA; Flavodoxin/Nitric Oxide Synthase; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase; Oxidoreductase; Flavoprotein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQ
LEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGM
F

Sequences:

>Translated_161_residues
MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQ
LEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGM
F
>Mature_160_residues
AELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQL
EGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF

Specific function: Unknown

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17241; Mature: 17110

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLA
CCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCHHH
ALSGAMKEFFDRCYYPVLGQLEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLI
HHHHHHHHHHHHCCHHHHHCCCCHHEEHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE
ICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF
EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLA
CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCHHH
ALSGAMKEFFDRCYYPVLGQLEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLI
HHHHHHHHHHHHCCHHHHHCCCCHHEEHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE
ICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF
EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA