Click here to switch to the map view.

The map label for this gene is 99082588

Identifier: 99082588

GI number: 99082588

Start: 2896222

End: 2896743

Strand: Direct

Name: 99082588

Synonym: TM1040_2748

Alternate gene names: NA

Gene position: 2896222-2896743 (Clockwise)

Preceding gene: 99082586

Following gene: 99082589

Centisome position: 90.48

GC content: 60.73

Gene sequence:

>522_bases
ATGATCGGGGATTTTGCAGGGCGGCTCAGCCACCAGATCAATCGCGGCACGGAAGTGATCCTCGCCGCGTTGATGGTGGC
GCTGGTGCTCGACGTCTGGATTGGCGTTGTGGATCGCTACTTCTTTCACTGGCAACTGCCCTGGCCCGAAGTCCTCGCGC
GATACCTGATGATCTGGGCTGCGATGCTCGCTGTGTCATCGGGGATCGCGCGGCGCGAACATATCGGACTGACGGCTGTG
CTAATGATCCTGCCTGCCCCTTTGCGTCGTGGCATGCTGATCCTCATCGACCTGATGACCTTTGCCCTGTTTTTCTACGT
CCTGTGGTTCGGGATCGGCTTTGCAGAGAGTGGCGCCAAACGGCAGGCGATGATCCTGGGCGCGACTTTGCAGCCCTTTT
ACATGGCGATCCCGGCCGCCGCGGCGTTGGCCTGCGTGCAAGTCGTCCTGGTGATGATCCGCGATGCAGGCGGCCAGCTC
GACCTCAATGACACCGATTCCAAGGAAGGAGCAGGCGCATGA

Upstream 100 bases:

>100_bases
CGTTTCAGCGTCGATATTTGTAGCTTAGTAACAAATAATGCTTGACTGAACGCCTACCTGCTCCTGAATATGTACCTAAA
TTACAAATCAGGGAGTCATC

Downstream 100 bases:

>100_bases
TCGTCGGCATCTGTTTTGTCGTGCTTCTCGCAGTTGGCATGCCCATCGGCTTTGCCATTGGTCTTGCGGGTGTCATCGGG
ATTTTCACCATGGGGGGCGG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHWQLPWPEVLARYLMIWAAMLAVSSGIARREHIGLTAV
LMILPAPLRRGMLILIDLMTFALFFYVLWFGIGFAESGAKRQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQL
DLNDTDSKEGAGA

Sequences:

>Translated_173_residues
MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHWQLPWPEVLARYLMIWAAMLAVSSGIARREHIGLTAV
LMILPAPLRRGMLILIDLMTFALFFYVLWFGIGFAESGAKRQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQL
DLNDTDSKEGAGA
>Mature_173_residues
MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHWQLPWPEVLARYLMIWAAMLAVSSGIARREHIGLTAV
LMILPAPLRRGMLILIDLMTFALFFYVLWFGIGFAESGAKRQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQL
DLNDTDSKEGAGA

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18979; Mature: 18979

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHWQLPWPEVLARYLMIWA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AMLAVSSGIARREHIGLTAVLMILPAPLRRGMLILIDLMTFALFFYVLWFGIGFAESGAK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQLDLNDTDSKEGAGA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHWQLPWPEVLARYLMIWA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AMLAVSSGIARREHIGLTAVLMILPAPLRRGMLILIDLMTFALFFYVLWFGIGFAESGAK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQLDLNDTDSKEGAGA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA